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-基本情報
登録情報 | データベース: SASBDB / ID: SASDFN7 |
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試料 | Complex with all 1H histone acetyltransferase Rtt109 with histones H3 and H4, histone chaperones Asf1 and Vps75 (1-225aa) (acquired in 100% v/v D2O)
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機能・相同性 | 機能・相同性情報 : / : / Formation of Senescence-Associated Heterochromatin Foci (SAHF) / : / : / histone H3K23 acetyltransferase activity / : / histone H3K56 acetyltransferase activity / : / H3 histone acetyltransferase complex ...: / : / Formation of Senescence-Associated Heterochromatin Foci (SAHF) / : / : / histone H3K23 acetyltransferase activity / : / histone H3K56 acetyltransferase activity / : / H3 histone acetyltransferase complex / : / DNA replication-dependent chromatin disassembly / histone H3K14 acetyltransferase activity / regulation of double-strand break repair via nonhomologous end joining / histone H3K9 acetyltransferase activity / maintenance of rDNA / acetyltransferase activator activity / peptidyl-lysine acetylation / replication-born double-strand break repair via sister chromatid exchange / histone H3 acetyltransferase activity / retrotransposon silencing / DNA replication-dependent chromatin assembly / nucleosome disassembly / histone H3K27 acetyltransferase activity / : / silent mating-type cassette heterochromatin formation / peptide-lysine-N-acetyltransferase activity / protein acetylation / subtelomeric heterochromatin formation / negative regulation of DNA damage checkpoint / regulation of DNA repair / ヒストンアセチルトランスフェラーゼ / positive regulation of transcription elongation by RNA polymerase II / regulation of protein phosphorylation / nucleosome assembly / double-strand break repair via nonhomologous end joining / structural constituent of chromatin / ヌクレオソーム / protein transport / chromatin organization / histone binding / 遺伝子発現の調節 / chromosome, telomeric region / protein heterodimerization activity / DNA damage response / chromatin binding / クロマチン / regulation of transcription by RNA polymerase II / DNA binding / identical protein binding / 細胞核 / 細胞質基質 類似検索 - 分子機能 |
生物種 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (パン酵母) Xenopus laevis (アフリカツメガエル) |
登録者 |
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-構造の表示
-ダウンロードとリンク
-モデル
-試料
試料 | 名称: Complex with all 1H histone acetyltransferase Rtt109 with histones H3 and H4, histone chaperones Asf1 and Vps75 (1-225aa) (acquired in 100% v/v D2O) 試料濃度: 1.92 mg/ml / Entity id: 1488 / 1489 / 1490 / 1492 / 1728 |
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バッファ | 名称: 50 mM citrate, 150 mM NaCl, 5 mM BME, 100% D2O / pH: 6.5 |
要素 #1488 | 名称: Vps75 1-225 / タイプ: protein 記述: Vacuolar protein sorting-associated protein 75 (1-225 aa)液胞 分子量: 26.554 / 分子数: 2 由来: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) 参照: UniProt: P53853 配列: MMSDQENENE HAKAFLGLAK CEEEVDAIER EVELYRLNKM KPVYEKRDAY IDEIAEFWKI VLSQHVSFAN YIRASDFKYI DTIDKIKVEW LALESEMYDT RDFSITFHFH GIEGDFKEQQ VTKVFQIKKG KDDQEDGILT SEPVPIEWPQ SYDSINPDLI KDKRSPEGKK ...配列: MMSDQENENE HAKAFLGLAK CEEEVDAIER EVELYRLNKM KPVYEKRDAY IDEIAEFWKI VLSQHVSFAN YIRASDFKYI DTIDKIKVEW LALESEMYDT RDFSITFHFH GIEGDFKEQQ VTKVFQIKKG KDDQEDGILT SEPVPIEWPQ SYDSINPDLI KDKRSPEGKK KYRQGMKTIF GWFRWTGLKP GKEFPHGDSL ASLFSEEIYP FCVKYYAEAQ RDLED |
要素 #1489 | 名称: Rtt109 / タイプ: protein / 記述: Histone acetyltransferase RTT109 / 分子量: 50.095 / 分子数: 1 由来: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) 参照: UniProt: Q07794 配列: MSLNDFLSSV LPVSEQFEYL SLQSIPLETH AVVTPNKDDK RVPKSTIKTQ HFFSLFHQGK VFFSLEVYVY VTLWDEADAE RLIFVSKADT NGYCNTRVSV RDITKIILEF ILSIDPNYYL QKVKPAIRSY KKISPELISA ASTPARTLRI LARRLKQSGS TVLKEIESPR ...配列: MSLNDFLSSV LPVSEQFEYL SLQSIPLETH AVVTPNKDDK RVPKSTIKTQ HFFSLFHQGK VFFSLEVYVY VTLWDEADAE RLIFVSKADT NGYCNTRVSV RDITKIILEF ILSIDPNYYL QKVKPAIRSY KKISPELISA ASTPARTLRI LARRLKQSGS TVLKEIESPR FQQDLYLSFT CPREILTKIC LFTRPASQYL FPDSSKNSKK HILNGEELMK WWGFILDRLL IECFQNDTQA KLRIPGEDPA RVRSYLRGMK YPLWQVGDIF TSKENSLAVY NIPLFPDDPK ARFIHQLAEE DRLLKVSLSS FWIELQERQE FKLSVTSSVM GISGYSLATP SLFPSSADVI VPKSRKQFRA IKKYITGEEY DTEEGAIEAF TNIRDFLLLR MATNLQSLTG KREHRERNQP VPASNINTLA ITMLKPRKKA KALPKT |
要素 #1490 | 名称: Asf1 / タイプ: protein / 記述: Histone chaperone ASF1 / 分子量: 19.125 / 分子数: 1 / 参照: UniProt: P32447 配列: MSIVSLLGIK VLNNPAKFTD PYEFEITFEC LESLKHDLEW KLTYVGSSRS LDHDQELDSI LVGPVPVGVN KFVFSADPPS AELIPASELV SVTVILLSCS YDGREFVRVG YYVNNEYDEE ELRENPPAKV QVDHIVRNIL AEKPRVTRFN IVWDNENEGD LYPPEQPGV |
要素 #1492 | 名称: H4 / タイプ: protein / 記述: Histone H4ヒストンH4 / 分子量: 11.367 / 分子数: 1 / 由来: Xenopus laevis / 参照: UniProt: P62799 配列: MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK VFLENVIRDA VTYTEHAKRK TVTAMDVVYA LKRQGRTLYG FGG |
要素 #1728 | 名称: H3 FL / タイプ: protein / 記述: Histone H3 full-length / 分子量: 15.328 / 分子数: 1 / 由来: Xenopus laevis / 参照: UniProt: Q6PI79 配列: MARTKQTARK STGGKAPRKQ LATKAARKSA PSTGGVKKPH RYRPGTVALR EIRRYQKSTE LLIRKLPFQR LVREIAQDFK TDLRFQSAAI GALQEASEAY LVGLFEDTNL CAIHAKRVTI MPKDIQLARR IRGERA |
-実験情報
ビーム | 設備名称: ILL D22 / 地域: Grenoble / 国: France / 線源: neutron source / 波長: 0.6 Å / スペクトロメータ・検出器間距離: 4 mm | |||||||||||||||||||||
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検出器 | 名称: 128 linear sensitive Reuter-Stokes detector / タイプ: 3He multidetector / Pixsize x: 0.8 mm | |||||||||||||||||||||
スキャン | タイトル: Complex with all 1H histone acetyltransferase Rtt109 with histones H3 and H4, histone chaperones Asf1 and Vps75 (1-225aa) (acquired in 100% v/v D2O) 測定日: 2018年5月30日 / セル温度: 25 °C / 照射時間: 8400 sec. / フレーム数: 1 / 単位: 1/A /
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距離分布関数 P(R) | ソフトウェア P(R): GNOM 5.0 / ポイント数: 98 /
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結果 | Experimental MW: 151 kDa / カーブのタイプ: single_conc
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