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- SASDFN6: DNA-binding protein HU-alpha -

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ID or keywords:

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Basic information

Entry
Database: SASBDB / ID: SASDFN6
SampleDNA-binding protein HU-alpha
  • DNA-binding protein HU-alpha (protein), Escherichia coli (strain K12)
Function / homology
Function and homology information


HU-DNA complex / DnaA-HU complex / bacterial nucleoid DNA packaging / chromosome condensation / DNA replication initiation / structural constituent of chromatin / DNA repair / DNA-templated transcription / DNA damage response / DNA binding ...HU-DNA complex / DnaA-HU complex / bacterial nucleoid DNA packaging / chromosome condensation / DNA replication initiation / structural constituent of chromatin / DNA repair / DNA-templated transcription / DNA damage response / DNA binding / identical protein binding / membrane / cytosol
Similarity search - Function
Histone-like DNA-binding protein, conserved site / Bacterial histone-like DNA-binding proteins signature. / Histone-like DNA-binding protein / Bacterial DNA-binding protein / bacterial (prokaryotic) histone like domain / Integration host factor (IHF)-like DNA-binding domain superfamily
Similarity search - Domain/homology
DNA-binding protein HU-alpha
Similarity search - Component
Biological speciesEscherichia coli (strain K12) (bacteria)
Contact author
  • Soumya G Remesh (Lawrence Berkeley National laboratory)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #3031
Type: atomic
Model #3048
Type: atomic

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Sample

SampleName: DNA-binding protein HU-alpha
BufferName: 10 mM Bis-Tris, 100 mM NaCl / pH: 7.5
Entity #1662Type: protein / Description: DNA-binding protein HU-alpha / Formula weight: 9.672 / Num. of mol.: 8 / Source: Escherichia coli (strain K12) / References: UniProt: P0ACF0
Sequence:
HMNKTQLIDV IAEKAELSKT QAKAALESTL AAITESLKEG DAVQLVGFGT FKVNHRAERT GRNPQTGKEI KIAAANVPAF VSGKALKDAV K

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Experimental information

BeamInstrument name: Advanced Light Source (ALS) 12.3.1 (SIBYLS)
City: Berkeley, CA / 国: USA / Type of source: X-ray synchrotron / Wavelength: 0.103 Å / Dist. spec. to detc.: 1.5 mm
DetectorName: Pilatus3 X 2M / Pixsize x: 172 mm
Scan
Title: DNA-binding protein HU-alpha / Measurement date: May 27, 2018 / Cell temperature: 10 °C / Exposure time: 3 sec. / Number of frames: 300 / Unit: 1/A /
MinMax
Q0.0109 0.3197
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 375 /
MinMax
Q0.024807 0.233276
P(R) point1 375
R0 107
Result
Experimental MW: 61 kDa / Type of curve: single_conc
P(R)GuinierGuinier error
Forward scattering, I09.137 9.42 0.026
Radius of gyration, Rg3.09 nm3.171 nm0.202

MinMax
D-10.7
Guinier point22 53

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