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- SASDF38: Myotillin immuniglobulin domains Ig1Ig2 (250-444) (Myotillin Ig1I... -

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Basic information

Entry
Database: SASBDB / ID: SASDF38
SampleMyotillin immuniglobulin domains Ig1Ig2 (250-444)
  • Myotillin Ig1Ig2 (250-444) (protein), Ig1Ig2 (250-444), Homo sapiens
Function / homology
Function and homology information


axon guidance receptor activity / structural constituent of muscle / homophilic cell-cell adhesion / alpha-actinin binding / muscle contraction / sarcolemma / synapse organization / Z disc / actin cytoskeleton / actin binding ...axon guidance receptor activity / structural constituent of muscle / homophilic cell-cell adhesion / alpha-actinin binding / muscle contraction / sarcolemma / synapse organization / Z disc / actin cytoskeleton / actin binding / axon / neuronal cell body / plasma membrane
Similarity search - Function
Immunoglobulin I-set / Immunoglobulin I-set domain / Immunoglobulin subtype 2 / Immunoglobulin C-2 Type / Immunoglobulin subtype / Immunoglobulin / Ig-like domain profile. / Immunoglobulin-like domain / Immunoglobulin-like domain superfamily / Immunoglobulin-like fold
Similarity search - Domain/homology
Biological speciesHomo sapiens (human)
Contact author
  • Melissa Graewert (EMBL-Hamburg, European Molecular Biology Laboratory (EMBL) - Hamburg outstation, Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany)

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Structure visualization

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Models

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Sample

SampleName: Myotillin immuniglobulin domains Ig1Ig2 (250-444) / Specimen concentration: 14.12 mg/ml
BufferName: 20 mM Na+-HEPES, 150 mM, NaCl, 5 % v/v glycerol, 1 mM DTT
pH: 7.4
Entity #1748Name: Ig1Ig2 (250-444) / Type: protein / Description: Myotillin Ig1Ig2 (250-444) / Formula weight: 22.279 / Num. of mol.: 1 / Source: Homo sapiens / References: UniProt: Q9UBF9
Sequence: GPAMPRFIQV PENMSIDEGR FCRMDFKVSG LPAPDVSWYL NGRTVQSDDL HKMIVSEKGL HSLIFEVVRA SDAGAYACVA KNRAGEATFT VQLDVLAKEH KRAPMFIYKP QSKKVLEGDS VKLECQISAI PPPKLFWKRN NEMVQFNTDR ISLYQDNTGR VTLLIKDVNK ...Sequence:
GPAMPRFIQV PENMSIDEGR FCRMDFKVSG LPAPDVSWYL NGRTVQSDDL HKMIVSEKGL HSLIFEVVRA SDAGAYACVA KNRAGEATFT VQLDVLAKEH KRAPMFIYKP QSKKVLEGDS VKLECQISAI PPPKLFWKRN NEMVQFNTDR ISLYQDNTGR VTLLIKDVNK KDAGWYTVSA VNEAGVTTCN TRLDVTARP

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Experimental information

BeamInstrument name: ESRF BM29 / City: Grenoble / 国: France / Type of source: X-ray synchrotron / Wavelength: 0.099 Å / Dist. spec. to detc.: 2.867 mm
DetectorName: Pilatus 1M / Type: Dectris / Pixsize x: 172 mm
Scan
Title: Myotillin immuniglobulin domains Ig1Ig2 (250-444) / Measurement date: Jun 27, 2019 / Storage temperature: 20 °C / Cell temperature: 20 °C / Unit: 1/nm /
MinMax
Q0.032 4.9674
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 557 /
MinMax
Q0.197824 2.83129
P(R) point1 557
R0 10.1
Result
Type of curve: single_conc
ExperimentalStandardPorod
MW17.3 kDa17.3 kDa18 kDa
Volume--29 nm3

P(R)GuinierGuinier error
Forward scattering, I017.3 17.3 0.02
Radius of gyration, Rg2.913 nm2.82 nm0.03

MinMax
D-10.1
Guinier point36 80

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