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- SASDF33: Antigen 43/Fragment antigen-binding region Fab10C12 (Ag43-Fab) complex -

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Basic information

Entry
Database: SASBDB / ID: SASDF33
SampleAntigen 43/Fragment antigen-binding region Fab10C12 (Ag43-Fab) complex
  • Antigen 43 (protein), Ag43, Escherichia coli
  • Fragment antigen-binding region Fab10C12 (protein), Fab10C12, Mus musculus
Biological speciesEscherichia coli (E. coli)
Mus musculus (house mouse)
Contact author
  • Andrew Whitten (ANSTO, Australian Nuclear Science and Technology Organisation, Kirrawee DC, NSW 2232, Australia)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #2814
Type: dummy / Software: (5.0) / Radius of dummy atoms: 3.25 A / Symmetry: P1 / Chi-square value: 1.215 / P-value: 0.381566
Model #2815
Type: atomic / Symmetry: P1 / Chi-square value: 3.357

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Sample

SampleName: Antigen 43/Fragment antigen-binding region Fab10C12 (Ag43-Fab) complex
Specimen concentration: 0.25-1.20 / Entity id: 1485 / 1486
BufferName: 25 mM HEPES 150 mM NaCl / pH: 7
Entity #1485Name: Ag43 / Type: protein / Description: Antigen 43 / Formula weight: 49.087 / Num. of mol.: 1 / Source: Escherichia coli
Sequence: ADIVVHPGET VNGGTLVNHD NQFVSGTANG VTVSTGLELG PDSDENTGGQ WIKAGGTGRN TTVTANGRQI VQAGGTASDT VIRDGGGQSL NGLAVNTTLD NRGEQWVHGG GKAAGTIINQ DGYQTIKHGG LATGTIVNTG AESSGQMVGG TAESTTINKN GRQVIWSSGM ...Sequence:
ADIVVHPGET VNGGTLVNHD NQFVSGTANG VTVSTGLELG PDSDENTGGQ WIKAGGTGRN TTVTANGRQI VQAGGTASDT VIRDGGGQSL NGLAVNTTLD NRGEQWVHGG GKAAGTIINQ DGYQTIKHGG LATGTIVNTG AESSGQMVGG TAESTTINKN GRQVIWSSGM ARDTLIYAGG DQTVHGEAHN TRLEGGNQYV HNGGTATETL INRDGWQVIK EGGTAAHTTI NQKGKLQVNA GGKASDVTQN TGGALVTSTA ATVTGTNRLG AFSVVAGKAD NVVLENGGRL DVLSGHTATN TRVDDGGTLD IRNGGAATTV SMGNGGVLLA DSGAAVSGTR SDGKAFSIGG GQADALMLEK GSSFTLNAGD TATDTTVNGG LFTARGGTLA GTTTLNNGAI LTLSGKTVNN DTLTIREGDA LLQGGSLTGN GSVEKSGSGT LTVSNTTLTQ KAVNLNEGTL TLNDSTVTTD VIAQRGTALK LTGSTVLNGA ID
Entity #1486Name: Fab10C12 / Type: protein / Description: Fragment antigen-binding region Fab10C12 / Formula weight: 46.565 / Num. of mol.: 1 / Source: Mus musculus
Sequence: SIVMTQTPKF LFVSVGDRVT ITCKASQSVN NDVAWYQQKP GQSPKLLIYF ASNRYTGVPD RFTGSGYGTD FTFTINTVQA EDLAVYFCQQ DYSSPQTFGG GTKLEVTRAD AAPTVSIFPP SSEQLTSGGA SVVCFLNNFY PKDINVKWKI DGSERQNGVL NSWTDQDSKD ...Sequence:
SIVMTQTPKF LFVSVGDRVT ITCKASQSVN NDVAWYQQKP GQSPKLLIYF ASNRYTGVPD RFTGSGYGTD FTFTINTVQA EDLAVYFCQQ DYSSPQTFGG GTKLEVTRAD AAPTVSIFPP SSEQLTSGGA SVVCFLNNFY PKDINVKWKI DGSERQNGVL NSWTDQDSKD STYSMSSTLT LTKDEYERHN SYTCEATHKT STSPIVKSFN RNECQVQLQQ PGTELVKPGA SVKLSCKASG YTFTNYWMHW VKQRPGQGLE WIGNIGPSSG NTNYGENFKT KATLTVDKSS STAYMQLSSL TSEDSAVYFC ARWGSIRAMD YWGQGTSVTV SSAKTTPPSV YPLAPGCGDT TGSSVTLGCL VKGYFPESVT VTWNSGSLSS SVHTFPALLQ SGLYTMSSSV TVPSSTWPSQ TVTCSVAHPA SSTTVDKKL

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Experimental information

BeamInstrument name: Australian Synchrotron SAXS/WAXS / City: Melbourne / 国: Australia / Shape: Point / Type of source: X-ray synchrotron / Wavelength: 0.10332 Å / Dist. spec. to detc.: 2.68 mm
DetectorName: Pilatus 1M / Type: Dectris / Pixsize x: 172 mm
Scan
Title: Antigen 43/Fragment antigen-binding region Fab10C12 (Ag43-Fab) complex
Measurement date: Nov 3, 2016 / Storage temperature: 4 °C / Cell temperature: 12 °C / Exposure time: 1 sec. / Number of frames: 14 / Unit: 1/A /
MinMax
Q0.0088 0.2989
Distance distribution function P(R)
Sofotware P(R): GNOM 4.6 / Number of points: 249 /
MinMax
Q0.008782 0.2989
P(R) point1 249
R0 150
Result
Type of curve: sec
ExperimentalStandardStandard errorPorod
MW92 kDa92 kDa5 85 kDa
Volume---103 nm3

P(R)GuinierGuinier error
Forward scattering, I00.02158 0.02173 8.0E-5
Radius of gyration, Rg4.28 nm4.29 nm0.04

MinMax
D-15
Guinier point1 14

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