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Yorodumi- SASDEX9: Hydroxypyruvate aldolase (HpcH/HpaI aldolase) (HpcH/HpaI aldolase) -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDEX9 |
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Sample | Hydroxypyruvate aldolase (HpcH/HpaI aldolase)
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Function / homology | HpcH/HpaI aldolase/citrate lyase domain / HpcH/HpaI aldolase/citrate lyase family / Pyruvate kinase-like domain superfamily / Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily / catalytic activity / HpcH/HpaI aldolase Function and homology information |
Biological species | Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) (bacteria) |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Data source
SASBDB page | SASDEX9 |
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-Related structure data
Similar structure data | Similarity search - Function & homologyF&H Search |
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-External links
Related items in Molecule of the Month |
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-Models
Model #2793 | Type: dummy / Radius of dummy atoms: 1.90 A / Symmetry: P32 / Chi-square value: 1.07 / P-value: 0.158445 |
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-Sample
Sample | Name: Hydroxypyruvate aldolase (HpcH/HpaI aldolase) / Specimen concentration: 8 mg/ml |
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Buffer | Name: 20 mM HEPES, / pH: 7.5 |
Entity #1457 | Type: protein / Description: HpcH/HpaI aldolase / Formula weight: 27.435 / Num. of mol.: 6 Source: Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) References: UniProt: A5VH82 Sequence: MHHHHHHNKV RTCWNEGRPA LAGWLQLPGT LHAEALARLD YDAVVIDMQH SPIDFGQVAP MLIAIELGGA EPFVRTQVND PSDIMKLLDA GAYGIIAPMV NTRAEAQTLA SALHYSPRGL RSFGPRRPSL RYGSGYLAQA SETVVGLAMI ETREALANID EILSVDGIDG ...Sequence: MHHHHHHNKV RTCWNEGRPA LAGWLQLPGT LHAEALARLD YDAVVIDMQH SPIDFGQVAP MLIAIELGGA EPFVRTQVND PSDIMKLLDA GAYGIIAPMV NTRAEAQTLA SALHYSPRGL RSFGPRRPSL RYGSGYLAQA SETVVGLAMI ETREALANID EILSVDGIDG VFIGPTDLAL DLGHAPLVDT EEAEVVSAIA HVRERAHAAG KRVGIFCGSG GFARVKLAEG FDFVTAAPDL AMLSAAARQV IADARAL |
-Experimental information
Beam | Instrument name: PETRA III EMBL P12 / City: Hamburg / 国: Germany / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.124 Å / Dist. spec. to detc.: 3 mm | ||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 6M | ||||||||||||||||||||||||||||||
Scan | Title: Hydroxypyruvate aldolase (HpcH/HpaI aldolase) / Measurement date: Nov 23, 2018 / Storage temperature: 20 °C / Cell temperature: 20 °C / Exposure time: 1 sec. / Number of frames: 51 / Unit: 1/nm /
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Distance distribution function P(R) | Sofotware P(R): GNOM 5.0 / Number of points: 1423 /
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Result | Type of curve: sec Comments: The quoted experimental MW is that determined from MALLS.
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