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Yorodumi- SASDDX9: PAS fold family protein mPAC-Δ132 with the addition of adenosine-... -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDDX9 |
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Sample | PAS fold family protein mPAC-Δ132 with the addition of adenosine-5'-[(α,β)-methyleno]triphosphate in the dark state (mPAC-Δ132, dark + ApCpp)
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Function / homology | Function and homology information cyclic nucleotide biosynthetic process / adenylate cyclase activity / intracellular signal transduction Similarity search - Function |
Biological species | Coleofasciculus chthonoplastes PCC 7420 (bacteria) |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Data source
SASBDB page | SASDDX9 |
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-Related structure data
Similar structure data | Similarity search - Function & homologyF&H Search |
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-External links
Related items in Molecule of the Month |
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-Models
Model #2062 | Type: atomic / Chi-square value: 16.4811533492 |
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Model #2157 | Type: dummy / Software: (2.8.1) / Radius of dummy atoms: 3.25 A / Chi-square value: 52.36 |
Model #2158 | Type: dummy / Software: (2.8.1) / Radius of dummy atoms: 1.90 A / Chi-square value: 52.36 |
-Sample
Sample | Name: PAS fold family protein mPAC-Δ132 with the addition of adenosine-5'-[(α,β)-methyleno]triphosphate in the dark state (mPAC-Δ132, dark + ApCpp) Specimen concentration: 5.10-9.10 |
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Buffer | Name: 20 mM HEPES, 150 mM NaCl, 5 mM MgCl2, 5 % w/v Glycerol, 1 mM ApCpp pH: 7.5 |
Entity #1098 | Name: mPAC / Type: protein / Description: PAS fold family / Formula weight: 39.015 / Num. of mol.: 2 / Source: Coleofasciculus chthonoplastes PCC 7420 / References: UniProt: B4VKN6 Sequence: GAMGSQAYRK GVQETVKLRD QAIAASSVGI VIADARLPDM PLIYVNPAFE EITGYSDAEV LGYNCRFLQG KDTSQPAVDQ LRAAIKAGEN CTVTLLNYRK DGTPFWNELT ISPIYDDHNN LTHFVGIQSD ISDRIKAEQA LRLEQEKSER LLLNILPKPI VDQLKQFEGS ...Sequence: GAMGSQAYRK GVQETVKLRD QAIAASSVGI VIADARLPDM PLIYVNPAFE EITGYSDAEV LGYNCRFLQG KDTSQPAVDQ LRAAIKAGEN CTVTLLNYRK DGTPFWNELT ISPIYDDHNN LTHFVGIQSD ISDRIKAEQA LRLEQEKSER LLLNILPKPI VDQLKQFEGS LAQQFTEATI LFADIVGFTQ LSAQMSPLEL LNLLNNIFSV FDKLAEKHGI EKIKTIGDAY MAVAGLPVAN DHHAEAIANM ALDMQQAIQQ FKTPQGEPFQ IRIGINTGLV VAGVIGIKKF SYDLWGDAVN VASRMESSGL PGKIQVTAAT KERLQDKYVF EKRGAIVVKG KGEMINYWLV GKQE |
-Experimental information
Beam | Instrument name: Swiss Light Source cSAXS / City: Villigen / 国: Switzerland / Type of source: X-ray synchrotron / Wavelength: 0.11 Å / Dist. spec. to detc.: 2.13 mm | ||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 2M | ||||||||||||||||||||||||||||||
Scan | Title: mPAC_d132 dark +ApCpp (PAS fold family with the addition of Adenosine-5'-[(α,β)-methyleno]triphosphate) Measurement date: Mar 11, 2015 / Cell temperature: 10 °C / Exposure time: 0.5 sec. / Number of frames: 200 / Unit: 1/A /
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Distance distribution function P(R) | Sofotware P(R): GNOM 5.0 / Number of points: 525 /
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Result | Type of curve: merged /
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