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- SASDDH6: Di-domain acyl carrier protein of the seryltransferase from prodi... -
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Open data
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Basic information
Entry | Database: SASBDB / ID: SASDDH6 |
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![]() | Di-domain acyl carrier protein of the seryltransferase from prodigiosin biosynthesis
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Function / homology | ![]() pyridoxal binding / Transferases; Acyltransferases; Aminoacyltransferases / transaminase activity / antibiotic biosynthetic process / pyridoxal phosphate binding / membrane Similarity search - Function |
Biological species | ![]() |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
-Data source
SASBDB page | ![]() |
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-Related structure data
Similar structure data | Similarity search - Function & homology ![]() |
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External links
Related items in Molecule of the Month |
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-Models
Model #2003 | ![]() Type: dummy / Software: (r6669) / Radius of dummy atoms: 1.80 A / Symmetry: P1 / Chi-square value: 0.068 |
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Model #2005 | ![]() Type: dummy / Software: (5) / Radius of dummy atoms: 2.00 A / Chi-square value: 0.068 |
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Sample
![]() | Name: Di-domain acyl carrier protein of the seryltransferase from prodigiosin biosynthesis Specimen concentration: 1.70-6.80 |
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Buffer | Name: 20 mM Tris supplemented with 5 mM DTT / pH: 7 |
Entity #1065 | Name: Di-domain ACP / Type: protein Description: Di-domain acyl carrier protein of PigH from prodigiosin biosynthesis Formula weight: 22.209 / Num. of mol.: 1 / Source: Serratia sp. ATCC 39006 / References: UniProt: Q5W264 Sequence: GSHMNDVTTE TYETLKQSVL HTFAQLTGYN VSELSLTSHL ENDLGVDSIA LAEIAVSLSR QFQLNTPLLI QDINTIKDAL DGILQREFQL SEKVEPAAIA LSGDADLWLG NLVRQIFASH SGYDVNALAL DAEIESDLGI DSVSVASAQG ELFNTLQLNS ETIIANCNTL ...Sequence: GSHMNDVTTE TYETLKQSVL HTFAQLTGYN VSELSLTSHL ENDLGVDSIA LAEIAVSLSR QFQLNTPLLI QDINTIKDAL DGILQREFQL SEKVEPAAIA LSGDADLWLG NLVRQIFASH SGYDVNALAL DAEIESDLGI DSVSVASAQG ELFNTLQLNS ETIIANCNTL SALKQCLAAR LVQEKGQDWF ELTRAPPPPP LRSGC |
-Experimental information
Beam | Instrument name: Synchrotron Light Research Institute BL1.3W City: Nakhon Ratchasima / 国: Thailand ![]() | |||||||||||||||||||||||||||||||||
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Detector | Name: Rayonix SX165 / Type: CCD / Pixsize x: 0.08 mm | |||||||||||||||||||||||||||||||||
Scan | Measurement date: Jan 13, 2016 / Storage temperature: 25 °C / Cell temperature: 25 °C / Exposure time: 600 sec. / Number of frames: 1 / Unit: 1/A /
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Distance distribution function P(R) |
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Result | Comments: Two DAMMIF-derived dummy atom models are displayed. Top: The best-fit individual DAMMIF model and corresponding fit to the SAXS data. Bottom: The average spatial representation of the ...Comments: Two DAMMIF-derived dummy atom models are displayed. Top: The best-fit individual DAMMIF model and corresponding fit to the SAXS data. Bottom: The average spatial representation of the protein obtained after the alignment of multiple individual DAMMIF models combined with volume and bead-occupancy corrections (damfilt).
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