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- SASDCK8: Lysozyme (WAXS) (Lysozyme C, Lysozyme, lys) -

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Basic information

Entry
Database: SASBDB / ID: SASDCK8
SampleLysozyme (WAXS)
  • Lysozyme C (protein), Lysozyme, lys, Gallus gallus
Function / homology
Function and homology information


Lactose synthesis / Antimicrobial peptides / Neutrophil degranulation / beta-N-acetylglucosaminidase activity / cell wall macromolecule catabolic process / lysozyme / lysozyme activity / killing of cells of another organism / defense response to Gram-negative bacterium / defense response to Gram-positive bacterium ...Lactose synthesis / Antimicrobial peptides / Neutrophil degranulation / beta-N-acetylglucosaminidase activity / cell wall macromolecule catabolic process / lysozyme / lysozyme activity / killing of cells of another organism / defense response to Gram-negative bacterium / defense response to Gram-positive bacterium / defense response to bacterium / endoplasmic reticulum / extracellular space / identical protein binding / cytoplasm
Similarity search - Function
Glycoside hydrolase, family 22, lysozyme / Glycoside hydrolase family 22 domain / Glycosyl hydrolases family 22 (GH22) domain signature. / Glycoside hydrolase, family 22 / C-type lysozyme/alpha-lactalbumin family / Glycosyl hydrolases family 22 (GH22) domain profile. / Alpha-lactalbumin / lysozyme C / Lysozyme-like domain superfamily
Similarity search - Domain/homology
Biological speciesGallus gallus (chicken)
Contact author
  • Maxim Petoukhov (EMBL-Hamburg, European Molecular Biology Laboratory (EMBL) - Hamburg outstation, Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Models

Model #1612
Type: atomic / Radius of dummy atoms: 1.90 A / Chi-square value: 2.050

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Sample

SampleName: Lysozyme (WAXS) / Specimen concentration: 19.40-25.10
BufferName: 40 mM Sodium Acetate pH 4.0, 50 mM NaCl / pH: 4
Entity #119Name: Lysozyme, lys / Type: protein / Description: Lysozyme C / Formula weight: 14.31 / Num. of mol.: 1 / Source: Gallus gallus / References: UniProt: P00698
Sequence:
KVFGRCELAA AMKRHGLDNY RGYSLGNWVC AAKFESNFNT QATNRNTDGS TDYGILQINS RWWCNDGRTP GSRNLCNIPC SALLSSDITA SVNCAKKIVS DGNGMNAWVA WRNRCKGTDV QAWIRGCRL

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Experimental information

BeamInstrument name: PETRA III P12 / City: Hamburg / 国: Germany / Type of source: X-ray synchrotronSynchrotron / Wavelength: 0.062 Å / Dist. spec. to detc.: 1.5 mm
DetectorName: Pilatus 2M
Scan
Title: Lysozyme WAXS / Measurement date: May 31, 2015 / Storage temperature: 20 °C / Cell temperature: 20 °C / Exposure time: 0.1 sec. / Unit: 1/nm /
MinMax
Q0.2415 17.8562
ResultExperimental MW: 12 kDa / Type of curve: merged
GuinierGuinier error
Forward scattering, I0648.36 0.93
Radius of gyration, Rg1.41 nm0.03

MinMax
Guinier point1 58

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