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- SASDCJ8: Glucose isomerase (WAXS) (Xylose isomerase, GI) -

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Basic information

Entry
Database: SASBDB / ID: SASDCJ8
SampleGlucose isomerase (WAXS)
  • Xylose isomerase (protein), GI, Streptomyces rubiginosus
Function / homology
Function and homology information


xylose isomerase / xylose isomerase activity / D-xylose metabolic process / magnesium ion binding / identical protein binding / cytoplasm
Similarity search - Function
Xylose isomerase, actinobacteria / Xylose isomerase / Xylose isomerase family profile. / Xylose isomerase-like, TIM barrel domain / Xylose isomerase-like TIM barrel / Xylose isomerase-like superfamily
Similarity search - Domain/homology
Biological speciesStreptomyces rubiginosus (bacteria)
Contact author
  • Maxim Petoukhov (EMBL-Hamburg, European Molecular Biology Laboratory (EMBL) - Hamburg outstation, Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Models

Model #1611
Type: atomic / Radius of dummy atoms: 1.90 A / Chi-square value: 29.490

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Sample

SampleName: Glucose isomerase (WAXS) / Specimen concentration: 3.60-14.50
BufferName: 100 mM tris pH 8.0, 100 mM NaCl, 1 mM MgCl2 / pH: 8
Entity #839Name: GI / Type: protein / Description: Xylose isomerase / Formula weight: 43.097 / Num. of mol.: 4 / Source: Streptomyces rubiginosus / References: UniProt: P24300
Sequence: NYQPTPEDRF TFGLWTVGWE GRDPFGDATR RALDPVESVR RLAELGAHGV TFHDDDLIPF GSSDSEREEH VKRFRQALDD TGMKVPMATT NLFTHPVFKD GGFTANDRDV RRYALRKTIR NIDLAVELGA ETYVAWGGRE GAESGGAKDV RDALDRMKEA FDLLGEYVTS ...Sequence:
NYQPTPEDRF TFGLWTVGWE GRDPFGDATR RALDPVESVR RLAELGAHGV TFHDDDLIPF GSSDSEREEH VKRFRQALDD TGMKVPMATT NLFTHPVFKD GGFTANDRDV RRYALRKTIR NIDLAVELGA ETYVAWGGRE GAESGGAKDV RDALDRMKEA FDLLGEYVTS QGYDIRFAIE PKPNEPRGDI LLPTVGHALA FIERLERPEL YGVNPEVGHE QMAGLNFPHG IAQALWAGKL FHIDLNGQNG IKYDQDLRFG AGDLRAAFWL VDLLESAGYS GPRHFDFKPP RTEDFDGVWA SAAGCMRNYL ILKERAAAFR ADPEVQEALR ASRLDELARP TAADGLQALL DDRSAFEEFD VDAAAARGMA FERLDQLAMD HLLGARG

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Experimental information

BeamInstrument name: PETRA III P12 / City: Hamburg / 国: Germany / Type of source: X-ray synchrotron / Wavelength: 0.062 Å
DetectorName: Pilatus 2M
Scan
Title: Glucose isomerase (WAXS) / Measurement date: Oct 17, 2016 / Storage temperature: 10 °C / Cell temperature: 10 °C / Exposure time: 0.2 sec. / Unit: 1/nm /
MinMax
Q0.0994 18.0049
ResultExperimental MW: 151 kDa / Type of curve: merged
GuinierGuinier error
Forward scattering, I07954.08 12.5
Radius of gyration, Rg3.23 nm0.05

MinMax
Guinier point5 25

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