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- SASDCE8: Beta amylase from sweet potato (WAXS) (Beta-amylase) -

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Open data


ID or keywords:

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Basic information

Entry
Database: SASBDB / ID: SASDCE8
SampleBeta amylase from sweet potato (WAXS)
  • Beta-amylase (protein), Ipomoea batatas
Function / homology
Function and homology information


beta-amylase / beta-amylase activity / polysaccharide catabolic process
Similarity search - Function
Glycoside hydrolase, family 14B, plant / Beta-amylase active site 2. / Glycoside hydrolase, family 14, conserved site / Beta-amylase active site 1. / Glycoside hydrolase, family 14 / Glycosyl hydrolase family 14 / Glycoside hydrolase superfamily
Similarity search - Domain/homology
Biological speciesIpomoea batatas (sweet potato)
Contact author
  • Maxim Petoukhov (EMBL-Hamburg, European Molecular Biology Laboratory (EMBL) - Hamburg outstation, Notkestraße 85, Geb. 25A, 22607 Hamburg, Deutschland, Germany)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #1607
Type: atomic / Software: (CRYSOL 3) / Radius of dummy atoms: 1.90 A / Chi-square value: 30.753

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Sample

SampleName: Beta amylase from sweet potato (WAXS) / Specimen concentration: 40.1 mg/ml
BufferName: tbs / pH: 7.5
Entity #833Type: protein / Description: Beta-amylase / Formula weight: 55.976 / Num. of mol.: 4 / Source: Ipomoea batatas / References: UniProt: P10537
Sequence: APIPGVMPIG NYVSLYVMLP LGVVNADNVF PDKEKVEDEL KQVKAGGCDG VMVDVWWGII EAKGPKQYDW SAYRELFQLV KKCGLKIQAI MSFHQCGGNV GDAVFIPIPQ WILQIGDKNP DIFYTNRAGN RNQEYLSLGV DNQRLFQGRT ALEMYRDFME SFRDNMADFL ...Sequence:
APIPGVMPIG NYVSLYVMLP LGVVNADNVF PDKEKVEDEL KQVKAGGCDG VMVDVWWGII EAKGPKQYDW SAYRELFQLV KKCGLKIQAI MSFHQCGGNV GDAVFIPIPQ WILQIGDKNP DIFYTNRAGN RNQEYLSLGV DNQRLFQGRT ALEMYRDFME SFRDNMADFL KAGDIVDIEV GCGAAGELRY PSYPETQGWV FPGIGEFQCY DKYMVADWKE AVKQAGNADW EMPGKGAGTY NDTPDKTEFF RPNGTYKTDM GKFFLTWYSN KLIIHGDQVL EEANKVFVGL RVNIAAKVSG IHWWYNHVSH AAELTAGFYN VAGRDGYRPI ARMLARHHAT LNFTCLEMRD SEQPAEAKSA PQELVQQVLS SGWKEYIDVA GENALPRYDA TAYNQMLLKL RPNGVNLNGP PKLKMSGLTY LRLSDDLLQT DNFELFKKFV KKMHADLDPS PNAISPAVLE RSNSAITIDE LMEATKGSRP FPWYDVTDMP VDGSNPFD

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Experimental information

BeamInstrument name: PETRA III P12 / City: Hamburg / 国: Germany / Type of source: X-ray synchrotron / Wavelength: 0.062 Å
DetectorName: Pilatus 2M
Scan
Title: Beta amylase from sweet potato (WAXS) / Measurement date: Jul 15, 2015 / Cell temperature: 20 °C / Unit: 1/nm /
MinMax
Q0.0869 17.9294
ResultExperimental MW: 157 kDa / Type of curve: single_conc
GuinierGuinier error
Forward scattering, I08102.35 16
Radius of gyration, Rg4.03 nm0.13

MinMax
Guinier point8 25

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