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Yorodumi- SASDBN9: Putative DNA binding protein YeeF-CT in complex with the cognate ... -
+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDBN9 |
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Sample | Putative DNA binding protein YeeF-CT in complex with the cognate immunity protein YezG from Bacillus subtilis
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Function / homology | Function and homology information LXG domain / LXG domain of WXG superfamily / LXG domain profile. / Immunity protein YezG-like / Immunity protein YezG-like superfamily / Immunity protein YezG-like / Type VII secretion system protein EssD-like / DNA/RNA non-specific endonuclease / DNA/RNA non-specific endonuclease superfamily Similarity search - Domain/homology |
Biological species | Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23) (bacteria) Bacillus subtilis subsp. spizizenii str. W23 |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Data source
SASBDB page | SASDBN9 |
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-Related structure data
Similar structure data | Similarity search - Function & homologyF&H Search |
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-Models
Model #1104 | Type: dummy / Software: DAMMIN and DAMAVER (2.7.2) / Radius of dummy atoms: 4.00 A / Chi-square value: 0.812 |
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-Sample
Sample | Name: Putative DNA binding protein YeeF-CT in complex with the cognate immunity protein YezG from Bacillus subtilis Specimen concentration: 7.5 mg/ml / Entity id: 573 / 574 |
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Buffer | Name: 20 mM HEPES 150 mM NaCl / pH: 7.5 |
Entity #573 | Name: YeeF / Type: protein / Description: Putative DNA binding protein / Formula weight: 18.402 / Num. of mol.: 2 Source: Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23) References: UniProt: E0TU96_BAC Sequence: MGSSHHHHHH SSGLVPRSHM ASIYKTKEGY TYTTDNYGRI TSVKADLQLG EAKRNQYAQS HAGKPQDRKP DDDGGALIAT QFKGSGQFDN IVPMNSQINR SGGRWYEMEQ EWAKALKEEP PQKVNVNIKA IYKGDSLRPD KFIVKFRIGD ADFEKVTIKN QSGG |
Entity #574 | Name: YezG / Type: protein / Description: YezG, cognate immunity protein of YeeF / Formula weight: 19.234 / Num. of mol.: 1 / Source: Bacillus subtilis subsp. spizizenii str. W23 / References: UniProt: E0TU95 Sequence: MDTPKMGDLY QRIANQINEM IPSEWENVYL YAEILDDSSE VYFYFNIPGK NEFLYSHNIP EHFNVSEDIY DDLLIELQES FEELREEYEK NNPETWTNLT LKLDRTGQFS IDYNYEDVIA SELNGSQRKA VWVYKNLGLM PKRKTVRDFL EDYIKTNEGK I |
-Experimental information
Beam | Instrument name: IMTECH / City: Chandigarh / 国: India / Type of source: X-ray in house / Wavelength: 0.15418 Å | |||||||||||||||||||||||||||||||||
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Detector | Name: 1D CMOS Mythen detector / Type: Diode | |||||||||||||||||||||||||||||||||
Scan | Title: Putative DNA binding protein YeeF-CT (528-669) in complex with the cognate immunity protein YezG from Bacillus subtilis Measurement date: Aug 18, 2016 / Storage temperature: 4 °C / Cell temperature: 25 °C / Exposure time: 1800 sec. / Number of frames: 1 / Unit: 1/nm /
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Distance distribution function P(R) | Sofotware P(R): GNOM 5.0 / Number of points: 290 /
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Result | Type of curve: single_conc /
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