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- SASDBN4: Callose synthase (AtGSLO5-IL) -

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Open data


ID or keywords:

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Basic information

Entry
Database: SASBDB / ID: SASDBN4
SampleCallose synthase
  • Callose synthase (protein), AtGSLO5-IL, Arabidopsis thaliana
Function / homology
Function and homology information


defense response by callose deposition / defense response by callose deposition in cell wall / salicylic acid mediated signaling pathway / 1,3-beta-glucan synthase / 1,3-beta-D-glucan synthase activity / (1->3)-beta-D-glucan biosynthetic process / 1,3-beta-D-glucan synthase complex / leaf morphogenesis / leaf senescence / innate immune response-activating signaling pathway ...defense response by callose deposition / defense response by callose deposition in cell wall / salicylic acid mediated signaling pathway / 1,3-beta-glucan synthase / 1,3-beta-D-glucan synthase activity / (1->3)-beta-D-glucan biosynthetic process / 1,3-beta-D-glucan synthase complex / leaf morphogenesis / leaf senescence / innate immune response-activating signaling pathway / pollen development / response to fungus / plasmodesma / defense response to fungus / defense response / regulation of cell shape / defense response to bacterium / Golgi apparatus / plasma membrane
Similarity search - Function
Glycosyl transferase, family 48 / 1,3-beta-glucan synthase subunit FKS1-like, domain-1 / 1,3-beta-glucan synthase component / 1,3-beta-glucan synthase subunit FKS1, domain-1 / 1,3-beta-glucan synthase subunit FKS1
Similarity search - Domain/homology
Biological speciesArabidopsis thaliana (thale cress)

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Models

Model #520
Type: other / Software: (2.7.1) / Radius of dummy atoms: 1.90 A / Symmetry: P8 / Chi-square value: 1.055
Model #521
Type: dummy / Software: (r6669) / Radius of dummy atoms: 6.30 A / Symmetry: P8 / Chi-square value: 1.278 / P-value: 0.050400

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Sample

SampleName: Callose synthase / Specimen concentration: 1 mg/ml
BufferName: Tris, 50 mM NaCl / pH: 7.3 / Composition: 50 mM NaCl
Entity #336Name: AtGSLO5-IL / Type: protein / Description: Callose synthase / Formula weight: 79.092 / Num. of mol.: 8 / Source: Arabidopsis thaliana / References: UniProt: Q9ZT82
Sequence: MASRGSHHHH HHGAGDRGPE FELGTRGSCA VVGLFDHLGE IRDMGQLRLR FQFFASAIQF NLMPEEQLLN ARGFGNKFKD GIHRLKLRYG FGRPFKKLES NQVEANKFAL IWNEIILAFR EEDIVSDREV ELLELPKNSW DVTVIRWPCF LLCNELLLAL SQARELIDAP ...Sequence:
MASRGSHHHH HHGAGDRGPE FELGTRGSCA VVGLFDHLGE IRDMGQLRLR FQFFASAIQF NLMPEEQLLN ARGFGNKFKD GIHRLKLRYG FGRPFKKLES NQVEANKFAL IWNEIILAFR EEDIVSDREV ELLELPKNSW DVTVIRWPCF LLCNELLLAL SQARELIDAP DKWLWHKICK NEYRRCAVVE AYDSIKHLLL SIIKVDTEEH SIITVFFQII NQSIQSEQFT KTFRVDLLPK IYETLQKLVG LVNDEETDSG RVVNVLQSLY EIATRQFFIE KKTTEQLSNE GLTPRDPASK LLFQNAIRLP DASNEDFYRQ VRRLHTILTS RDSMHSVPVN LEARRRIAFF SNSLFMNMPH APQVEKMMAF SVLTPYYSEE VVYSKEQLRN ETEDGISTLY YLQTIYADEW KNFKERMHRE GIKTDSELWT TKLRDLRLWA SYRGQTLART VRGMMYYYRA LKMLAFLDSA SEMDIREGAQ ELGSVRNLQG ELGGQSDGFV SENDRSSLSR ASSSVSTLYK GHEYGTALMK FTYVVACQIY GSQKAKKEPQ AEEILYLMKQ NEALRIAYVD EVPAGRGETD YYSVLVKYDH QLEKEVEIFR VKLPGPVKLG EGKPENQNHA MIFTRGDAVQ TIDMNQDSYF EEALKMRNLL QEYNHYHGIR KPTILGVRHA HGLSAWSHPQ FEK

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Experimental information

BeamInstrument name: PETRA III EMBL P12 / City: Hamburg / 国: Germany / Type of source: X-ray synchrotron / Wavelength: 0.12 Å / Dist. spec. to detc.: 3.1 mm
DetectorName: Pilatus 2M
Scan
Title: Callose / Measurement date: Jun 2, 2015 / Storage temperature: 20 °C / Cell temperature: 10 °C / Exposure time: 0.05 sec. / Number of frames: 18 / Unit: 1/nm /
MinMax
Q0.027 4.8012
Distance distribution function P(R)
Sofotware P(R): GNOM 5.0 / Number of points: 433 /
MinMax
Q0.0718658 1.21325
P(R) point1 433
R0 30
Result
Type of curve: single_conc /
ExperimentalPorod
MW623 kDa646 kDa
Volume-1033.34 nm3

GuinierP(R)Guinier error
Forward scattering, I025374.1 --
Radius of gyration, Rg7.99 nm7.94 nm0.34

MinMaxError
D-30 3
Guinier point12 52 -

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