+Open data
-Basic information
Entry | Database: SASBDB / ID: SASDAB2 |
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Sample | Cytochrome c from equine heart
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Function / homology | Function and homology information cytochrome c-heme linkage / cytochrome complex / positive regulation of cysteine-type endopeptidase activity / mitochondrial electron transport, cytochrome c to oxygen / mitochondrial electron transport, ubiquinol to cytochrome c / positive regulation of cysteine-type endopeptidase activity involved in apoptotic process / : / mitochondrial intermembrane space / electron transfer activity / positive regulation of apoptotic process ...cytochrome c-heme linkage / cytochrome complex / positive regulation of cysteine-type endopeptidase activity / mitochondrial electron transport, cytochrome c to oxygen / mitochondrial electron transport, ubiquinol to cytochrome c / positive regulation of cysteine-type endopeptidase activity involved in apoptotic process / : / mitochondrial intermembrane space / electron transfer activity / positive regulation of apoptotic process / lipid binding / heme binding / apoptotic process / identical protein binding / metal ion binding / cytosol Similarity search - Function |
Biological species | Equus caballus (horse) |
Contact author |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Data source
SASBDB page | SASDAB2 |
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-Related structure data
Similar structure data |
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-External links
Related items in Molecule of the Month |
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-Models
Model #15 | Type: atomic / Software: (2.8.3) / Radius of dummy atoms: 1.90 A / Comment: 1AKK / Chi-square value: 1.068 Search similar-shape structures of this assembly by Omokage search (details) |
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-Sample
Sample | Name: Cytochrome c from equine heart / Purity method: gel filtration / Sample MW: 35.3 kDa / Specimen concentration: 10 mg/ml / Concentration method: nanodrop / Entity id: 1445 / 1446 |
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Buffer | Name: 25 mM HEPES, 100 mM NaCl, 3% v/v glycerol / pH: 7.5 |
Entity #1445 | Name: CytoC / Type: protein / Description: Cytochrome c / Formula weight: 11.701 / Num. of mol.: 1 / Source: Equus caballus / References: UniProt: P00004 Sequence: GDVEKGKKIF VQKCAQCHTV EKGGKHKTGP NLHGLFGRKT GQAPGFTYTD ANKNKGITWK EETLMEYLEN PKKYIPGTKM IFAGIKKKTE REDLIAYLKK ATNE |
Entity #1446 | Name: Heme C / Type: other / Description: Heme C / Formula weight: 0.618 / Num. of mol.: 1 Sequence: C34H34FeN4 O4 |
-Experimental information
Beam | Instrument name: PETRA III EMBL P12 / City: Hamburg / 国: Germany / Type of source: X-ray synchrotron / Wavelength: 0.124 Å / Dist. spec. to detc.: 3 mm | |||||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 6M | |||||||||||||||||||||||||||||||||
Scan | Title: Cytochrome c from equine heart / Measurement date: Apr 8, 2018 / Storage temperature: 20 °C / Cell temperature: 10 °C / Exposure time: 0.5 sec. / Number of frames: 58 / Unit: 1/nm /
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Distance distribution function P(R) | Sofotware P(R): GNOM 5.0 / Number of points: 2185 /
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Result | Type of curve: sec /
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