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- PDB-8bqs: Cryo-EM structure of the I-II-III2-IV2 respiratory supercomplex f... -

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Basic information

Entry
Database: PDB / ID: 8bqs
TitleCryo-EM structure of the I-II-III2-IV2 respiratory supercomplex from Tetrahymena thermophila
Components
  • (Acyl carrier ...) x 2
  • (Cytochrome c oxidase subunit ...) x 3
  • (Gamma-carbonic ...) x 2
  • (NADH dehydrogenase [ubiquinone] ...) x 7
  • (NADH dehydrogenase subunit ...) x 6
  • (NADH-ubiquinone oxidoreductase ...) x 7
  • (SURF1-like protein) x 2
  • (Transmembrane ...Transmembrane protein) x 35
  • (Transposase) x 2
  • (Zf-Tim10_DDP domain-containing ...) x 2
  • 2 iron, 2 sulfur cluster-binding protein
  • 2-oxoglutarate/malate carrier protein
  • 37S ribosomal protein S25, mitochondrialRibosome
  • 39S ribosomal protein L9, mitochondrialRibosome
  • ABC transporterATP-binding cassette transporter
  • ATP synthase subunit e, mitochondrial
  • Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
  • Annexin
  • Apocytochrome b
  • CHCH domain-containing protein
  • COX assembly mitochondrial protein
  • COXTT10
  • COXTT12,Transmembrane protein,Transmembrane protein
  • COXTT22
  • COXTT27
  • COXTT28
  • COXTT9
  • CTF/NF-I domain-containing protein
  • CX9C domain-containing protein
  • Carrier protein
  • Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,chain 150
  • Complex I-MNLL
  • Complex III subunit VIICoenzyme Q – cytochrome c reductase
  • Cullin domain-containing protein
  • Cytochrome protein c1
  • DUF4885 domain-containing protein
  • Decapping nuclease
  • Diphthamide synthesis protein
  • DnaJ domain protein
  • ETC complex I subunit motif protein
  • GRAM domain protein
  • Iron-binding zinc finger CDGSH type protein
  • Lipid-A-disaccharide synthase
  • Lysozyme
  • M16 family peptidase, putative
  • Mobilization protein
  • NAD-dependent epimerase/dehydratase family protein
  • NADH dehydrogenase, putative
  • ND5a
  • NDUA13
  • NDUB10
  • NDUB4
  • NDUB6
  • NDUB8
  • NDUPH2
  • NDUTT10
  • NDUTT11
  • NDUTT12
  • NmrA domain-containing protein
  • Oxoglutarate/malate translocator protein, putative
  • PH domain-containing protein
  • Peptidase M16 inactive domain protein
  • Phage proteinBacteriophage
  • Protein phosphatase 2C, putative
  • RNase III domain-containing protein
  • Ribosomal protein L51/S25/CI-B8 domain proteinRibosome
  • Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit
  • SDHTT11
  • Structural proteinProtein
  • Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
  • Thioredoxin
  • Tim10/DDP family zinc finger protein
  • TraB family protein
  • Transcription factor apfi protein, putative
  • UQCRTT1
  • UQCRTT2
  • UQCRTT3
  • Ubiquinol-cytochrome C reductase hinge protein
  • Uncharacterized protein
  • YflT domain-containing protein
  • Ymf57
  • Ymf58
  • Ymf62
  • Ymf65
  • Ymf67
  • Ymf68
  • Ymf70
  • Ymf75
  • Zinc-finger proteinZinc finger
  • succinate dehydrogenase complex iron-sulfur subunit D
  • succinate dehydrogenase
KeywordsELECTRON TRANSPORT / Ciliate / Mitochondrial / Supercomplex
Function / homology
Function and homology information


NADH:ubiquinone reductase (H+-translocating) / thiosulfate transmembrane transporter activity / oxaloacetate transmembrane transporter activity / lipid-A-disaccharide synthase / lipid-A-disaccharide synthase activity / malate transmembrane transporter activity / quinol-cytochrome-c reductase / protein maturation by [2Fe-2S] cluster transfer / medium-chain fatty acid-CoA ligase activity / succinate transmembrane transporter activity ...NADH:ubiquinone reductase (H+-translocating) / thiosulfate transmembrane transporter activity / oxaloacetate transmembrane transporter activity / lipid-A-disaccharide synthase / lipid-A-disaccharide synthase activity / malate transmembrane transporter activity / quinol-cytochrome-c reductase / protein maturation by [2Fe-2S] cluster transfer / medium-chain fatty acid-CoA ligase activity / succinate transmembrane transporter activity / P450-containing electron transport chain / : / sulfate transmembrane transporter activity / protein processing involved in protein targeting to mitochondrion / mitochondrial cytochrome c oxidase assembly / succinate dehydrogenase / succinate dehydrogenase (quinone) activity / phosphate ion transmembrane transport / mitochondrial respiratory chain complex IV / mitochondrial respiratory chain complex III / cytochrome-c oxidase / antiporter activity / ubiquinone-6 biosynthetic process / ubiquinol-cytochrome-c reductase activity / mitochondrial electron transport, cytochrome c to oxygen / oxidoreductase activity, acting on NAD(P)H / cytochrome-c oxidase activity / 3 iron, 4 sulfur cluster binding / lipid A biosynthetic process / mitochondrial electron transport, ubiquinol to cytochrome c / NADH dehydrogenase activity / Golgi organization / NADH:ubiquinone reductase (H+-translocating) / mitochondrial respiratory chain complex I / ubiquinone binding / mitochondrial electron transport, NADH to ubiquinone / transmembrane transporter activity / respirasome / chloroplast thylakoid membrane / mitochondrial respiratory chain complex I assembly / endoplasmic reticulum-Golgi intermediate compartment / acyl binding / NADH dehydrogenase (ubiquinone) activity / acyl carrier activity / electron transport coupled proton transport / quinone binding / ATP synthesis coupled electron transport / tricarboxylic acid cycle / aerobic respiration / respiratory electron transport chain / mitochondrion organization / chloroplast / fatty acid metabolic process / electron transport chain / mitochondrial membrane / phospholipid binding / 2 iron, 2 sulfur cluster binding / metalloendopeptidase activity / NAD binding / protein transport / FMN binding / flavin adenine dinucleotide binding / 4 iron, 4 sulfur cluster binding / response to oxidative stress / mitochondrial inner membrane / electron transfer activity / oxidoreductase activity / ribosome / copper ion binding / DNA-binding transcription factor activity / heme binding / protein-containing complex binding / negative regulation of apoptotic process / protein kinase binding / endoplasmic reticulum / mitochondrion / membrane / nucleus / metal ion binding / plasma membrane / cytosol
Similarity search - Function
Surfeit locus 1/Shy1 / Surfeit locus 1/4 / TraB/PryY-like / SURF1 family / SURF1 family profile. / CTF transcription factor/nuclear factor 1, DNA-binding domain / CTF/NF-I DNA-binding domain profile. / Glycosyl transferase, family 19 / Lipid-A-disaccharide synthetase / Tim10-like ...Surfeit locus 1/Shy1 / Surfeit locus 1/4 / TraB/PryY-like / SURF1 family / SURF1 family profile. / CTF transcription factor/nuclear factor 1, DNA-binding domain / CTF/NF-I DNA-binding domain profile. / Glycosyl transferase, family 19 / Lipid-A-disaccharide synthetase / Tim10-like / Tim10-like domain superfamily / Tim10/DDP family zinc finger / Mitochondrial substrate/solute carrier / Mitochondrial carrier domain superfamily / : / Mitochondrial carrier protein / Solute carrier (Solcar) repeat profile. / Iron-binding zinc finger, CDGSH type / MitoNEET, CDGSH iron-sulfur domain / CDGSH-type zinc finger. Function unknown. / Dynactin subunit 5 / NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminal / NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit / Succinate dehydrogenase, flavoprotein subunit / Adrenodoxin / Regulator of chromosome condensation (RCC1) repeat / Regulator of chromosome condensation, RCC1 / Regulator of chromosome condensation (RCC1) repeat profile. / Succinate dehydrogenase/fumarate reductase, flavoprotein subunit / Fumarate reductase/succinate dehydrogenase, FAD-binding site / FAD-dependent oxidoreductase SdhA/FrdA/AprA / Fumarate reductase / succinate dehydrogenase FAD-binding site. / 4Fe-4S dicluster domain / Succinate dehydrogenase/fumarate reductase iron-sulphur protein / Succinate dehydogenase/fumarate reductase N-terminal / 2Fe-2S iron-sulfur cluster binding domain / Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II / Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal / Fumarate reductase flavoprotein C-term / Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily / Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily / FAD-dependent oxidoreductase 2, FAD binding domain / Alpha-helical ferredoxin / Cytochrome c oxidase subunit Vb, zinc binding region signature. / FAD binding domain / Cytochrome c oxidase, subunit Vb / Cytochrome c oxidase, subunit Vb superfamily / Cytochrome c oxidase subunit Vb / Cytochrome c oxidase subunit Vb, zinc binding domain profile. / DnaJ domain / Ubiquinol-cytochrome C reductase hinge domain / Ubiquinol-cytochrome C reductase hinge domain superfamily / Ubiquinol-cytochrome C reductase hinge protein / Cytochrome c/quinol oxidase subunit II / DnaJ molecular chaperone homology domain / dnaJ domain profile. / Cytochrome c1 / Cytochrome C1 family / 2Fe-2S ferredoxin, iron-sulphur binding site / 2Fe-2S ferredoxin-type iron-sulfur binding region signature. / Chaperone J-domain superfamily / Cytochrome b/b6, C-terminal domain superfamily / Cytochrome b/b6/petB / DnaJ domain / Cytochrome c oxidase, subunit I, copper-binding site / Heme-copper oxidase catalytic subunit, copper B binding region signature. / Cytochrome c oxidase-like, subunit I domain / Cytochrome oxidase subunit I profile. / Cytochrome c oxidase subunit I / Cytochrome c oxidase-like, subunit I superfamily / Cytochrome C and Quinol oxidase polypeptide I / Hexapeptide repeat / Rieske iron-sulphur protein, C-terminal / Cytochrome b/b6, N-terminal / Soluble ligand binding domain / Cytochrome b/b6-like domain superfamily / Cytochrome b/b6 N-terminal region profile. / Di-haem cytochrome, transmembrane / SLBB domain / Cytochrome C oxidase subunit II, periplasmic domain / 2Fe-2S iron-sulfur cluster binding domain / Cytochrome c oxidase subunit II-like C-terminal / Cytochrome oxidase subunit II copper A binding domain profile. / Rieske iron-sulphur protein / Bacterial transferase hexapeptide (six repeats) / Zinc finger, CHCC-type / Zinc-finger domain / Peptidase M16, C-terminal / Peptidase M16 inactive domain / Peptidase M16, N-terminal / Insulinase (Peptidase family M16) / Metalloenzyme, LuxS/M16 peptidase-like / NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily / NADH dehydrogenase ubiquinone Fe-S protein 4 / NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 / NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 / ETC complex I subunit conserved region / NADH ubiquinone oxidoreductase subunit NDUFA12
Similarity search - Domain/homology
1,2-Distearoyl-sn-glycerophosphoethanolamine / Chem-8Q1 / ADENOSINE-5'-DIPHOSPHATE / ADENOSINE-5'-TRIPHOSPHATE / CARDIOLIPIN / COPPER (II) ION / DINUCLEAR COPPER ION / FE3-S4 CLUSTER / FLAVIN-ADENINE DINUCLEOTIDE / FE2/S2 (INORGANIC) CLUSTER ...1,2-Distearoyl-sn-glycerophosphoethanolamine / Chem-8Q1 / ADENOSINE-5'-DIPHOSPHATE / ADENOSINE-5'-TRIPHOSPHATE / CARDIOLIPIN / COPPER (II) ION / DINUCLEAR COPPER ION / FE3-S4 CLUSTER / FLAVIN-ADENINE DINUCLEOTIDE / FE2/S2 (INORGANIC) CLUSTER / FLAVIN MONONUCLEOTIDE / HEME-A / HEME C / PROTOPORPHYRIN IX CONTAINING FE / : / Chem-LPP / Chem-NDP / 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE / IRON/SULFUR CLUSTER / URIDINE-5'-DIPHOSPHATE / Ubiquinone-8 / Transmembrane protein, putative / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 / Oxoglutarate/malate translocator protein, putative / NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit / Transmembrane protein, putative / Transmembrane protein / SURF1-like protein / Uncharacterized protein / Uncharacterized protein / Diphthamide synthesis protein / Transmembrane protein / Transmembrane protein, putative / Uncharacterized protein / SURF1-like protein / Transmembrane protein / NADH dehydrogenase, putative / Transmembrane protein / succinate dehydrogenase / Transmembrane protein, putative / Gamma-carbonic anhydrase / Transmembrane protein / Iron-binding zinc finger CDGSH type protein / Transcription factor apfi protein, putative / Uncharacterized protein / Transmembrane protein, putative / Uncharacterized protein / Ribosomal protein L51/S25/CI-B8 domain protein / Transmembrane protein / Acyl carrier protein / Transmembrane protein / NADH-ubiquinone oxidoreductase 1, chain, putative / NADH-ubiquinone oxidoreductase 24 kDa subunit / Uncharacterized protein / Transmembrane protein, putative / Transmembrane protein / Transmembrane protein / Transmembrane protein, putative / Peptidase M16 inactive domain protein / Transmembrane protein, putative / Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit / Transmembrane protein / Uncharacterized protein / Transmembrane protein, putative / Uncharacterized protein / M16 family peptidase, putative / Zinc-finger protein / NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial / Transmembrane protein / NAD-dependent epimerase/dehydratase family protein / Transmembrane protein, putative / Transmembrane protein / Uncharacterized protein / Thioredoxin / CTF/NF-I domain-containing protein / Transmembrane protein, putative / Transmembrane protein, putative / DnaJ domain protein / lipid-A-disaccharide synthase / Transmembrane protein / Protein phosphatase 2C, putative / Transmembrane protein, putative / Transmembrane protein, putative / Uncharacterized protein / Transmembrane protein, putative / Chromosome condensation regulator RCC1 repeat protein / Transmembrane protein / Transmembrane protein, putative / 2 iron, 2 sulfur cluster-binding protein / Transmembrane protein, putative / Transmembrane protein / Acyl carrier protein / Gamma-carbonic anhydrase / Uncharacterized protein / Transmembrane protein, putative / Carrier protein / Uncharacterized protein / Tim10/DDP family zinc finger protein / Transmembrane protein / Uncharacterized protein
Similarity search - Component
Biological speciesTetrahymena thermophila SB210 (eukaryote)
MethodELECTRON MICROSCOPY / single particle reconstruction / cryo EM / Resolution: 2.9 Å
AuthorsMuhleip, A. / Kock Flygaard, R. / Baradaran, R. / Amunts, A.
Funding support Sweden, European Union, 4items
OrganizationGrant numberCountry
The Swedish Foundation for Strategic ResearchFFL15:0325 Sweden
Cancerfonden2017/1041 Sweden
European Research Council (ERC)ERC-2018-StG-805230European Union
Knut and Alice Wallenberg Foundation2018.0080 Sweden
CitationJournal: To Be Published
Title: Structural basis of mitochondrial membrane bending by I-II-III2-IV2 supercomplex
Authors: Muhleip, A. / Kock Flygaard, R. / Baradaran, R. / Haapanen, O. / Gruhl, T. / Tobiasson, V. / Marechal, A. / Sharma, V. / Amunts, A.
History
DepositionNov 21, 2022Deposition site: PDBE / Processing site: PDBE
Revision 1.0Aug 23, 2023Provider: repository / Type: Initial release

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A0: Lipid-A-disaccharide synthase
A1: NAD-dependent epimerase/dehydratase family protein
A2: DnaJ domain protein
A3: Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
A4: RNase III domain-containing protein
A5: 37S ribosomal protein S25, mitochondrial
A6: Transmembrane protein, putative
A7: CX9C domain-containing protein
A8: ND5a
A9: Transmembrane protein, putative
AA: NADH dehydrogenase subunit 5
AB: NADH-ubiquinone oxidoreductase 75 kDa subunit
AC: NADH-ubiquinone oxidoreductase chain 4
AD: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
AE: NADH dehydrogenase subunit 7
AF: Ymf65
AG: Transcription factor apfi protein, putative
AH: NADH-ubiquinone oxidoreductase chain 1
AI: NADH-ubiquinone oxidoreductase 24 kDa subunit
AJ: Ymf62
AK: Gamma-carbonic anhydrase
AL: NADH-ubiquinone oxidoreductase 1, chain, putative
AM: Gamma-carbonic anhydrase
AN: ETC complex I subunit motif protein
AO: NADH dehydrogenase subunit 9
AP: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
AQ: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial
AR: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
AS: NADH dehydrogenase, putative
AT: NADH dehydrogenase subunit 10
AU: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit
AV: Acyl carrier protein
AW: Acyl carrier protein
AX: NADH-ubiquinone oxidoreductase chain 3
AY: Ymf58
AZ: Ribosomal protein L51/S25/CI-B8 domain protein
B0: Transmembrane protein, putative
B1: ATP synthase subunit e, mitochondrial
B2: GRAM domain protein
B3: Transmembrane protein, putative
B4: Transmembrane protein, putative
B5: Transmembrane protein, putative
B6: NADH dehydrogenase subunit 1
BA: Transmembrane protein
BB: Transmembrane protein, putative
BC: NDUB8
BD: Transmembrane protein, putative
BE: NDUPH2
BF: NDUB10
BG: NDUA13
BH: NADH dehydrogenase subunit 2
BI: 2 iron, 2 sulfur cluster-binding protein
BJ: Thioredoxin
BK: COX assembly mitochondrial protein
BL: Transmembrane protein, putative
BM: Transmembrane protein, putative
BN: PH domain-containing protein
BO: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8
BP: NDUB6
BQ: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4
BR: Zinc-finger protein
BS: NDUB4
BT: NDUTT10
BU: NDUTT11
BV: NDUTT12
BW: CHCH domain-containing protein
BX: Transmembrane protein, putative
BY: Ymf57
BZ: Complex I-MNLL
CH: Diphthamide synthesis protein
CM: Transmembrane protein, putative
CL: Transposase
CA: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
CI: DUF4885 domain-containing protein
CB: succinate dehydrogenase
CF: Transmembrane protein, putative
CG: Uncharacterized protein
CK: Transmembrane protein, putative
CE: NmrA domain-containing protein
CJ: Transmembrane protein, putative
CN: Transmembrane protein, putative
CC: Transmembrane protein
CO: SDHTT11
CD: succinate dehydrogenase complex iron-sulfur subunit D
A: Peptidase M16 inactive domain protein
B: M16 family peptidase, putative
C: Apocytochrome b
D: Cytochrome protein c1
E: Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit
F: Ubiquinol-cytochrome C reductase hinge protein
G: UQCRTT1
H: Transmembrane protein, putative
I: Transmembrane protein, putative
J: UQCRTT3
K: Transmembrane protein, putative
L: UQCRTT2
a: Peptidase M16 inactive domain protein
b: M16 family peptidase, putative
c: Apocytochrome b
d: Cytochrome protein c1
e: Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit
f: Ubiquinol-cytochrome C reductase hinge protein
g: UQCRTT1
h: Transmembrane protein, putative
i: Transmembrane protein, putative
k: Transmembrane protein, putative
l: UQCRTT2
j: UQCRTT3
DA: Cytochrome c oxidase subunit 1
DB: Cytochrome c oxidase subunit 2
DC: Ymf68
DD: Cytochrome C oxidase subunit Vb protein
DE: Transmembrane protein, putative
DF: Structural protein
DG: Transmembrane protein, putative
DH: Transmembrane protein, putative
DI: Transmembrane protein
DJ: Transmembrane protein, putative
DK: CTF/NF-I domain-containing protein
DM: Transmembrane protein, putative
DN: Ymf67
DO: Protein phosphatase 2C, putative
DP: SURF1-like protein
DQ: TraB family protein
DR: Transmembrane protein, putative
DS: Oxoglutarate/malate translocator protein, putative
DT: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, mitochondrial
DU: Carrier protein
DV: 2-oxoglutarate/malate carrier protein
DW: SURF1-like protein
DX: COXTT9
DY: COXTT10
DZ: 39S ribosomal protein L9, mitochondrial
EA: COXTT12,Transmembrane protein,Transmembrane protein
EB: Transmembrane protein, putative
EC: COXTT27
ED: Ymf75
EE: Mobilization protein
EF: Iron-binding zinc finger CDGSH type protein
EG: COXTT28
EH: Transmembrane protein, putative
EI: Transmembrane protein
EV: Decapping nuclease
EK: Complex III subunit VII
EL: Transmembrane protein, putative
EM: Transmembrane protein, putative
EN: COXTT22
EO: Transmembrane protein, putative
EP: Phage protein
EQ: Transmembrane protein, putative
ER: Lysozyme
ES: Ymf70
ET: Zf-Tim10_DDP domain-containing protein
EU: ABC transporter
EJ: YflT domain-containing protein
EW: Cullin domain-containing protein
EX: Zf-Tim10_DDP domain-containing protein
EY: Annexin
EZ: Transposase
FA: Tim10/DDP family zinc finger protein
Da: Cytochrome c oxidase subunit 1
Db: Cytochrome c oxidase subunit 2
Dc: Ymf68
Dd: Cytochrome C oxidase subunit Vb protein
De: Transmembrane protein, putative
Df: Structural protein
Dg: Transmembrane protein, putative
Dh: Transmembrane protein, putative
Di: Transmembrane protein
Dj: Transmembrane protein, putative
Dk: CTF/NF-I domain-containing protein
Dm: Transmembrane protein, putative
Dn: Ymf67
Do: Protein phosphatase 2C, putative
Dp: SURF1-like protein
Dq: TraB family protein
Dr: Transmembrane protein, putative
Ds: Oxoglutarate/malate translocator protein, putative
Dt: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, mitochondrial
Du: Carrier protein
Dv: 2-oxoglutarate/malate carrier protein
Dw: SURF1-like protein
Dx: COXTT9
Dy: COXTT10
Dz: 39S ribosomal protein L9, mitochondrial
Ea: COXTT12,Transmembrane protein,Transmembrane protein
Eb: Transmembrane protein, putative
Ec: COXTT27
Ed: Ymf75
Ee: Mobilization protein
Ef: Iron-binding zinc finger CDGSH type protein
Eg: COXTT28
Eh: Transmembrane protein, putative
Ei: Transmembrane protein
Ev: Decapping nuclease
Ek: Complex III subunit VII
El: Transmembrane protein, putative
Em: Transmembrane protein, putative
En: COXTT22
Eo: Transmembrane protein, putative
Ep: Phage protein
Eq: Transmembrane protein, putative
Er: Lysozyme
Es: Ymf70
Et: Zf-Tim10_DDP domain-containing protein
Eu: ABC transporter
Ej: YflT domain-containing protein
Ew: Cullin domain-containing protein
Ex: Zf-Tim10_DDP domain-containing protein
Ey: Annexin
Ez: Transposase
Fa: Tim10/DDP family zinc finger protein
Dl: Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,chain 150
DL: Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,chain 150
hetero molecules


Theoretical massNumber of molelcules
Total (without water)6,250,635598
Polymers5,867,484214
Non-polymers383,150384
Water0
1


  • Idetical with deposited unit
  • defined by author&software
TypeNameSymmetry operationNumber
identity operation1_5551

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Components

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Protein , 82 types, 123 molecules A0A1A2A3A4A5A7A8AFAGAJANASAYAZB1B2BCBEBFBGBIBJBKBNBPBRBSBTBU...

#1: Protein Lipid-A-disaccharide synthase /


Mass: 59307.289 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22E24, lipid-A-disaccharide synthase
#2: Protein NAD-dependent epimerase/dehydratase family protein


Mass: 41375.090 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MLH2
#3: Protein DnaJ domain protein


Mass: 36878.367 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22DR7
#4: Protein Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II


Mass: 36709.441 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24HK5
#5: Protein RNase III domain-containing protein


Mass: 35409.246 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LUQ4
#6: Protein 37S ribosomal protein S25, mitochondrial / Ribosome


Mass: 33201.797 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MIJ7
#8: Protein CX9C domain-containing protein


Mass: 28412.805 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MMF4
#9: Protein ND5a


Mass: 25493.336 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#16: Protein Ymf65


Mass: 43146.160 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q951A3
#17: Protein Transcription factor apfi protein, putative


Mass: 39793.414 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M8Q7
#20: Protein Ymf62


Mass: 30448.471 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y2
#24: Protein ETC complex I subunit motif protein


Mass: 24277.859 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23ND5
#29: Protein NADH dehydrogenase, putative /


Mass: 20167.854 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M2Y3
#35: Protein Ymf58


Mass: 13509.949 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Z5
#36: Protein Ribosomal protein L51/S25/CI-B8 domain protein / Ribosome


Mass: 12157.782 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MA77
#38: Protein ATP synthase subunit e, mitochondrial /


Mass: 11283.534 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22E95
#39: Protein GRAM domain protein


Mass: 10920.431 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7X4R4
#46: Protein NDUB8


Mass: 24150.469 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M855
#48: Protein NDUPH2


Mass: 22446.637 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23KE0
#49: Protein NDUB10


Mass: 22167.137 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23KG0
#50: Protein NDUA13


Mass: 21045.617 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M2U4
#52: Protein 2 iron, 2 sulfur cluster-binding protein


Mass: 19564.221 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22W11
#53: Protein Thioredoxin /


Mass: 19540.191 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22AI5
#54: Protein COX assembly mitochondrial protein


Mass: 17078.342 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M1N8
#57: Protein PH domain-containing protein


Mass: 15785.234 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22SC4
#59: Protein NDUB6


Mass: 15444.344 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q231G0
#61: Protein Zinc-finger protein / Zinc finger


Mass: 15141.296 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MK02
#62: Protein NDUB4


Mass: 14410.395 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MG29
#63: Protein NDUTT10


Mass: 14963.529 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#64: Protein NDUTT11


Mass: 15334.371 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#65: Protein NDUTT12


Mass: 13983.049 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#66: Protein CHCH domain-containing protein


Mass: 13747.362 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MIM0
#68: Protein Ymf57


Mass: 12473.938 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q951C2
#69: Protein Complex I-MNLL


Mass: 12103.036 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22W63
#70: Protein Diphthamide synthesis protein


Mass: 22894.336 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LX66
#72: Protein Transposase /


Mass: 11027.419 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7XBF5
#73: Protein Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial


Mass: 70082.758 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23DI3, succinate dehydrogenase
#74: Protein DUF4885 domain-containing protein


Mass: 12979.428 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22YL0
#75: Protein succinate dehydrogenase /


Mass: 36002.402 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M403
#77: Protein Uncharacterized protein


Mass: 23627.730 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MEX7
#79: Protein NmrA domain-containing protein


Mass: 36376.008 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24I09
#85: Protein Peptidase M16 inactive domain protein


Mass: 58023.914 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MGU2
#86: Protein M16 family peptidase, putative


Mass: 53030.543 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MJ25
#87: Protein Apocytochrome b


Mass: 50635.547 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Z1
#88: Protein Cytochrome protein c1 /


Mass: 37616.629 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24IM5
#89: Protein Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit


Mass: 30696.961 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MIC7
#90: Protein Ubiquinol-cytochrome C reductase hinge protein


Mass: 9885.511 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23K66
#91: Protein UQCRTT1


Mass: 39193.523 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23F81
#94: Protein UQCRTT3


Mass: 5634.938 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#99: Protein Ymf68


Mass: 72782.539 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y6
#102: Protein Structural protein / Protein


Mass: 27946.445 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24I72
#107: Protein CTF/NF-I domain-containing protein


Mass: 116812.750 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22CI1
#109: Protein Ymf67


Mass: 54538.531 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y7
#110: Protein Protein phosphatase 2C, putative


Mass: 53011.297 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22FX8
#111: Protein SURF1-like protein


Mass: 47087.973 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M1Q4
#112: Protein TraB family protein


Mass: 45064.949 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23DP7
#114: Protein Oxoglutarate/malate translocator protein, putative


Mass: 40434.270 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: A4VDV3
#116: Protein Carrier protein


Mass: 37095.141 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22ZA6
#117: Protein 2-oxoglutarate/malate carrier protein


Mass: 36132.316 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23M99
#118: Protein SURF1-like protein


Mass: 35794.367 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LTZ4
#119: Protein COXTT9


Mass: 29865.686 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LY65
#120: Protein COXTT10


Mass: 28101.486 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MD70
#121: Protein 39S ribosomal protein L9, mitochondrial / Ribosome


Mass: 27034.711 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7X4J9
#122: Protein COXTT12,Transmembrane protein,Transmembrane protein


Mass: 25953.754 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M3P9
#124: Protein COXTT27


Mass: 23368.416 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#125: Protein Ymf75


Mass: 23325.801 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q951A7
#126: Protein Mobilization protein /


Mass: 23257.660 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23F08
#127: Protein Iron-binding zinc finger CDGSH type protein


Mass: 21476.887 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M8P0
#128: Protein COXTT28


Mass: 11121.555 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#131: Protein Decapping nuclease


Mass: 10242.719 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LVX0
#132: Protein Complex III subunit VII / Coenzyme Q – cytochrome c reductase


Mass: 19882.758 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q230X6
#135: Protein COXTT22


Mass: 17701.115 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MFV5
#137: Protein Phage protein / Bacteriophage


Mass: 14740.897 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24C97
#139: Protein Lysozyme /


Mass: 12273.913 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M9E7
#140: Protein Ymf70


Mass: 10891.920 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y0
#142: Protein ABC transporter / ATP-binding cassette transporter


Mass: 10418.697 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LTF1
#143: Protein YflT domain-containing protein


Mass: 19979.320 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M8Y9
#144: Protein Cullin domain-containing protein


Mass: 8965.917 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22N23
#146: Protein Annexin /


Mass: 8155.360 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q233U0
#147: Protein Transposase /


Mass: 8081.111 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22A35
#148: Protein Tim10/DDP family zinc finger protein


Mass: 8008.990 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7X3D6
#149: Protein Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,chain 150


Mass: 50912.336 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22RF2

+
Transmembrane ... , 35 types, 52 molecules A6A9B0B3B4B5BABBBDBLBMBXCMCFCKCJCNCCHhIiKkDEDeDGDgDHDh...

#7: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 29389.660 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24C39
#10: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 26545.146 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24F24
#37: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 11451.183 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MI60
#40: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 9942.366 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: A4VD20
#41: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 8787.116 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22DC2
#42: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 8445.937 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MIK1
#44: Protein Transmembrane protein /


Mass: 24823.297 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MIE0
#45: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 24419.150 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22Z32
#47: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 23971.033 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LT77
#55: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 16909.242 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22HE4
#56: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 15831.701 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M9B3
#67: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 13340.979 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22T55
#71: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 9168.366 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22HD6
#76: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 35124.293 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q248F8
#78: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 11188.824 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q24CW6
#80: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 11957.518 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23S01
#81: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 7244.434 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7XF00
#82: Protein Transmembrane protein /


Mass: 7036.020 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23RH8
#92: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 15677.771 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M484
#93: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 14262.554 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MM45
#95: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 7455.741 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MFL6
#101: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 15618.258 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7XCY5
#103: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 12786.321 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23DS4
#104: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 16427.672 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MGF9
#105: Protein Transmembrane protein /


Mass: 28652.682 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7X287
#106: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 26601.174 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7WZP1
#108: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 57814.465 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22PJ5
#113: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 41307.387 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23DG8
#123: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 24701.131 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LZX8
#129: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 20388.264 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23D87
#130: Protein Transmembrane protein /


Mass: 20025.109 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MKT6
#133: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 18801.604 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23VY4
#134: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 18600.445 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22DP8
#136: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 15588.598 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23TE5
#138: Protein Transmembrane protein, putative / Transmembrane protein


Mass: 14344.524 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22W32

+
NADH dehydrogenase subunit ... , 6 types, 6 molecules AAAEAOATB6BH

#11: Protein NADH dehydrogenase subunit 5 /


Mass: 88179.844 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q950Z0, NADH:ubiquinone reductase (H+-translocating)
#15: Protein NADH dehydrogenase subunit 7 /


Mass: 51227.477 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q951B1, NADH:ubiquinone reductase (H+-translocating)
#25: Protein NADH dehydrogenase subunit 9 /


Mass: 23830.291 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q950Z3, NADH:ubiquinone reductase (H+-translocating)
#30: Protein NADH dehydrogenase subunit 10 /


Mass: 18324.260 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q951B4, NADH:ubiquinone reductase (H+-translocating)
#43: Protein NADH dehydrogenase subunit 1 /


Mass: 7238.754 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#51: Protein NADH dehydrogenase subunit 2 /


Mass: 20899.889 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q951B2, NADH:ubiquinone reductase (H+-translocating)

+
NADH-ubiquinone oxidoreductase ... , 7 types, 7 molecules ABACAHAIALAUAX

#12: Protein NADH-ubiquinone oxidoreductase 75 kDa subunit


Mass: 80580.789 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23KA9
#13: Protein NADH-ubiquinone oxidoreductase chain 4


Mass: 58690.043 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q950X9, NADH:ubiquinone reductase (H+-translocating)
#18: Protein NADH-ubiquinone oxidoreductase chain 1


Mass: 32636.770 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q950Y3, NADH:ubiquinone reductase (H+-translocating)
#19: Protein NADH-ubiquinone oxidoreductase 24 kDa subunit


Mass: 31216.697 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MEP0
#22: Protein NADH-ubiquinone oxidoreductase 1, chain, putative


Mass: 28053.535 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MDW5
#31: Protein NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit


Mass: 17381.809 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7LT42
#34: Protein NADH-ubiquinone oxidoreductase chain 3


Mass: 14416.898 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q950Z7, NADH:ubiquinone reductase (H+-translocating)

+
NADH dehydrogenase [ubiquinone] ... , 7 types, 8 molecules ADAPAQARBOBQDTDt

#14: Protein NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial


Mass: 52313.699 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
References: UniProt: Q23KE4, NADH:ubiquinone reductase (H+-translocating)
#26: Protein NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Mass: 22890.570 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: A4VDQ6
#27: Protein NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial


Mass: 22698.301 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q233X7
#28: Protein NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial


Mass: 21642.377 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MK61
#58: Protein NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8


Mass: 15689.792 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23B10
#60: Protein NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4


Mass: 15193.583 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MAF0
#115: Protein NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, mitochondrial


Mass: 37552.980 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23DZ5

+
Gamma-carbonic ... , 2 types, 2 molecules AKAM

#21: Protein Gamma-carbonic anhydrase


Mass: 28216.734 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22XU5
#23: Protein Gamma-carbonic anhydrase


Mass: 25395.969 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7M6S0

+
Acyl carrier ... , 2 types, 2 molecules AVAW

#32: Protein Acyl carrier protein /


Mass: 16249.438 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q22XT6
#33: Protein Acyl carrier protein /


Mass: 15428.433 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: I7MD12

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Protein/peptide , 3 types, 4 molecules COCDLl

#83: Protein/peptide SDHTT11


Mass: 5459.540 Da / Num. of mol.: 1 / Source method: isolated from a natural source
Details: succinate dehydrogenase Tetrahymena thermophila subunit 11 GenBank: DY684362.1
Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#84: Protein/peptide succinate dehydrogenase complex iron-sulfur subunit D


Mass: 5566.625 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210
#96: Protein/peptide UQCRTT2


Mass: 4850.612 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210

+
Cytochrome c oxidase subunit ... , 3 types, 6 molecules DADaDBDbDDDd

#97: Protein Cytochrome c oxidase subunit 1 /


Mass: 80578.977 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y4
#98: Protein Cytochrome c oxidase subunit 2 /


Mass: 72388.883 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q950Y9
#100: Protein Cytochrome C oxidase subunit Vb protein /


Mass: 75417.328 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q23FF5

+
Zf-Tim10 DDP domain-containing ... , 2 types, 4 molecules ETEtEXEx

#141: Protein Zf-Tim10_DDP domain-containing protein


Mass: 10435.701 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: Q231A8
#145: Protein Zf-Tim10_DDP domain-containing protein


Mass: 8354.574 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Tetrahymena thermophila SB210 (eukaryote) / Strain: SB210 / References: UniProt: W7XDM6

+
Non-polymers , 24 types, 384 molecules

#150: Chemical...
ChemComp-CDL / CARDIOLIPIN / DIPHOSPHATIDYL GLYCEROL / BIS-(1,2-DIACYL-SN-GLYCERO-3-PHOSPHO)-1',3'-SN-GLYCEROL / Cardiolipin


Mass: 1464.043 Da / Num. of mol.: 162 / Source method: obtained synthetically / Formula: C81H156O17P2 / Feature type: SUBJECT OF INVESTIGATION / Comment: phospholipid*YM
#151: Chemical ChemComp-UDP / URIDINE-5'-DIPHOSPHATE / Uridine diphosphate


Type: RNA linking / Mass: 404.161 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C9H14N2O12P2 / Comment: UDP*YM
#152: Chemical
ChemComp-MG / MAGNESIUM ION


Mass: 24.305 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: Mg
#153: Chemical...
ChemComp-PC1 / 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE / 3-SN-PHOSPHATIDYLCHOLINE / Phosphatidylcholine


Mass: 790.145 Da / Num. of mol.: 97 / Source method: obtained synthetically / Formula: C44H88NO8P / Feature type: SUBJECT OF INVESTIGATION / Comment: phospholipid*YM
#154: Chemical ChemComp-NDP / NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE / Nicotinamide adenine dinucleotide phosphate


Mass: 745.421 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C21H30N7O17P3
#155: Chemical...
ChemComp-3PE / 1,2-Distearoyl-sn-glycerophosphoethanolamine / 3-SN-PHOSPHATIDYLETHANOLAMINE / 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE / Phosphatidylethanolamine


Mass: 748.065 Da / Num. of mol.: 45 / Source method: obtained synthetically / Formula: C41H82NO8P / Feature type: SUBJECT OF INVESTIGATION / Comment: phospholipid*YM
#156: Chemical
ChemComp-LPP / 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE / 1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE / L-B,G-DIPALMITOYL-A-PHOSPHATIDIC ACID DISODIUM SALT / 3-SN-PHOSPHATIDIC ACID / 1,2-DIPALMITOYLDISODIUM SALT


Mass: 648.891 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C35H69O8P / Feature type: SUBJECT OF INVESTIGATION / Comment: phospholipid*YM
#157: Chemical ChemComp-ADP / ADENOSINE-5'-DIPHOSPHATE / Adenosine diphosphate


Mass: 427.201 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: C10H15N5O10P2 / Comment: ADP, energy-carrying molecule*YM
#158: Chemical
ChemComp-FES / FE2/S2 (INORGANIC) CLUSTER / Iron–sulfur cluster


Mass: 175.820 Da / Num. of mol.: 10 / Source method: obtained synthetically / Formula: Fe2S2 / Feature type: SUBJECT OF INVESTIGATION
#159: Chemical
ChemComp-SF4 / IRON/SULFUR CLUSTER / Iron–sulfur cluster


Mass: 351.640 Da / Num. of mol.: 7 / Source method: obtained synthetically / Formula: Fe4S4 / Feature type: SUBJECT OF INVESTIGATION
#160: Chemical ChemComp-FMN / FLAVIN MONONUCLEOTIDE / RIBOFLAVIN MONOPHOSPHATE / Flavin mononucleotide


Mass: 456.344 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C17H21N4O9P / Feature type: SUBJECT OF INVESTIGATION
#161: Chemical ChemComp-8Q1 / S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] dodecanethioate / S-dodecanoyl-4'-phosphopantetheine


Mass: 540.651 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C23H45N2O8PS
#162: Chemical ChemComp-ZN / ZINC ION


Mass: 65.409 Da / Num. of mol.: 3 / Source method: obtained synthetically / Formula: Zn
#163: Chemical
ChemComp-CA / CALCIUM ION


Mass: 40.078 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: Ca
#164: Chemical ChemComp-FAD / FLAVIN-ADENINE DINUCLEOTIDE / Flavin adenine dinucleotide


Mass: 785.550 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: C27H33N9O15P2 / Feature type: SUBJECT OF INVESTIGATION / Comment: FAD*YM
#165: Chemical ChemComp-F3S / FE3-S4 CLUSTER / Iron–sulfur cluster


Mass: 295.795 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: Fe3S4 / Feature type: SUBJECT OF INVESTIGATION
#166: Chemical ChemComp-HEC / HEME C / Heme C


Mass: 618.503 Da / Num. of mol.: 3 / Source method: obtained synthetically / Formula: C34H34FeN4O4 / Feature type: SUBJECT OF INVESTIGATION
#167: Chemical
ChemComp-UQ8 / Ubiquinone-8 / 2,3-dimethoxy-5-methyl-6-[(6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-oc taen-1-yl]cyclohexa-2,5-diene-1,4-dione


Mass: 727.109 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C49H74O4 / Feature type: SUBJECT OF INVESTIGATION
#168: Chemical
ChemComp-HEM / PROTOPORPHYRIN IX CONTAINING FE / HEME / Heme B


Mass: 616.487 Da / Num. of mol.: 6 / Source method: obtained synthetically / Formula: C34H32FeN4O4 / Feature type: SUBJECT OF INVESTIGATION
#169: Chemical
ChemComp-HEA / HEME-A / Heme A


Mass: 852.837 Da / Num. of mol.: 4 / Source method: obtained synthetically / Formula: C49H56FeN4O6 / Feature type: SUBJECT OF INVESTIGATION
#170: Chemical ChemComp-CU / COPPER (II) ION / Copper


Mass: 63.546 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: Cu / Feature type: SUBJECT OF INVESTIGATION
#171: Chemical ChemComp-CUA / DINUCLEAR COPPER ION


Mass: 127.092 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: Cu2 / Feature type: SUBJECT OF INVESTIGATION
#172: Chemical ChemComp-K / POTASSIUM ION


Mass: 39.098 Da / Num. of mol.: 1 / Source method: obtained synthetically / Formula: K
#173: Chemical ChemComp-ATP / ADENOSINE-5'-TRIPHOSPHATE / Adenosine triphosphate


Mass: 507.181 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: C10H16N5O13P3 / Comment: ATP, energy-carrying molecule*YM

+
Details

Has ligand of interestY

-
Experimental details

-
Experiment

ExperimentMethod: ELECTRON MICROSCOPY
EM experimentAggregation state: PARTICLE / 3D reconstruction method: single particle reconstruction

-
Sample preparation

ComponentName: respiratory chain supercomplex from the ciliate Tetrahymena thermophila
Type: COMPLEX / Entity ID: #1-#149 / Source: NATURAL
Molecular weightExperimental value: NO
Source (natural)Organism: Tetrahymena thermophila SB210 (eukaryote)
Buffer solutionpH: 7.4
SpecimenEmbedding applied: NO / Shadowing applied: NO / Staining applied: NO / Vitrification applied: YES
VitrificationCryogen name: ETHANE

-
Electron microscopy imaging

Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company
MicroscopyModel: FEI TITAN KRIOS
Electron gunElectron source: FIELD EMISSION GUN / Accelerating voltage: 300 kV / Illumination mode: FLOOD BEAM
Electron lensMode: BRIGHT FIELDBright-field microscopy / Nominal defocus max: 2200 nm / Nominal defocus min: 600 nm
Image recordingElectron dose: 31 e/Å2 / Detector mode: COUNTING / Film or detector model: GATAN K2 QUANTUM (4k x 4k)

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Processing

EM softwareName: PHENIX / Version: 1.20.1_4487 / Category: model refinement
CTF correctionType: PHASE FLIPPING AND AMPLITUDE CORRECTION
3D reconstructionResolution: 2.9 Å / Resolution method: FSC 0.143 CUT-OFF / Num. of particles: 138746 / Symmetry type: POINT
RefinementCross valid method: NONE
Refine LS restraints
Refine-IDTypeDev idealNumber
ELECTRON MICROSCOPYf_bond_d0.002409457
ELECTRON MICROSCOPYf_angle_d0.535549429
ELECTRON MICROSCOPYf_dihedral_angle_d12.965158588
ELECTRON MICROSCOPYf_chiral_restr0.05555792
ELECTRON MICROSCOPYf_plane_restr0.00367826

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