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- ChemComp-LXC: beta-L-xylopyranose -

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Basic information

EntryDatabase: PDB chemical components / ID: LXC
NameName: beta-L-xylopyranose
Synonyms: beta-L-xylose; L-xylose; xylose; L-XYLOSE (CYCLIC FORM)

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Chemical information

Composition
Formula: C5H10O5 / Number of atoms: 20 / Formula weight: 150.13 / Formal charge: 0
Others

1gw9

Type: L-saccharide, beta linking / PDB classification: ATOMS / Three letter code: LXC / Model coordinates PDB-ID: 1GW9
History
Create componentMar 13, 2002
Modify descriptorJun 4, 2011
Other modificationAug 12, 2019
Other modificationDec 19, 2019
Other modificationJul 3, 2020
Modify nameJul 17, 2020
Modify synonymsJul 17, 2020
Modify atom idJul 17, 2020
Modify component atom idJul 17, 2020
External linksUniChem / ChemSpider / Brenda / ChEBI / CompTox / Metabolights / Nikkaji / PubChem / PubChem_TPharma / SureChEMBL / ZINC / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 10.04OC1C(O)COC(O)C1O
CACTVS 3.341O[CH]1CO[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0C1C(C(C(C(O1)O)O)O)O

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SMILES CANONICAL

CACTVS 3.341O[C@H]1CO[C@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C1[C@@H]([C@H]([C@@H]([C@H](O1)O)O)O)O

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InChI

InChI 1.03InChI=1S/C5H10O5/c6-2-1-10-5(9)4(8)3(2)7/h2-9H,1H2/t2-,3+,4-,5-/m0/s1

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InChIKey

InChI 1.03SRBFZHDQGSBBOR-QTBDOELSSA-N

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SYSTEMATIC NAME

ACDLabs 10.04beta-L-xylopyranose
OpenEye OEToolkits 1.5.0(2S,3S,4R,5S)-oxane-2,3,4,5-tetrol

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CONDENSED IUPAC CARBOHYDRATE SYMBOL

GMML 1.0LXylpb

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COMMON NAME

GMML 1.0b-L-xylopyranose

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IUPAC CARBOHYDRATE SYMBOL

PDB-CARE 1.0b-L-Xylp

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SNFG CARBOHYDRATE SYMBOL

GMML 1.0Xyl

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PDB entries

Showing all 4 items

PDB-1gw9:
Tri-iodide derivative of Xylose Isomerase from Streptomyces Rubiginosus

PDB-2dsf:
Structure of the complex of C-terminal lobe of bovine lactoferrin with xylose at 2.8A resolution

PDB-2fgl:
An alkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27

PDB-5zjv:
Crystal structure of the catalytic domain of MCR-1 (cMCR-1) in complex with xylose

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