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- EMDB-75829: Bacteriophage Goslar Baseplate -

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Open data


ID or keywords:

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Basic information

Entry
Database: EMDB / ID: EMD-75829
TitleBacteriophage Goslar Baseplate
Map data
Sample
  • Virus: Goslarvirus
    • Protein or peptide: x 12 types
KeywordsCollar / WAC / Whiskers / VIRAL PROTEIN
Function / homology
Function and homology information


SH3 fold domain associated with phage DNA polymerases / : / : / SH3 fold domain associated with phage DNA polymerases / Family of unknown function (DUF7194) / Putative phage tail tube protein / : / Family of unknown function (DUF7208) / : / Phage tail tube protein ...SH3 fold domain associated with phage DNA polymerases / : / : / SH3 fold domain associated with phage DNA polymerases / Family of unknown function (DUF7194) / Putative phage tail tube protein / : / Family of unknown function (DUF7208) / : / Phage tail tube protein / : / Bacteriophage phiKZ, gp29PR
Similarity search - Domain/homology
Virion structural protein / Uncharacterized protein / Uncharacterized protein / SH3 fold domain-containing protein / Uncharacterized protein / Uncharacterized protein / Baseplate wedge protein / Tail sheath protein gp29 gp29PR domain-containing protein / Virion structural protein / Uncharacterized protein ...Virion structural protein / Uncharacterized protein / Uncharacterized protein / SH3 fold domain-containing protein / Uncharacterized protein / Uncharacterized protein / Baseplate wedge protein / Tail sheath protein gp29 gp29PR domain-containing protein / Virion structural protein / Uncharacterized protein / Uncharacterized protein / Uncharacterized protein
Similarity search - Component
Biological speciesGoslarvirus
Methodsingle particle reconstruction / cryo EM / Resolution: 3.88 Å
AuthorsBasu D / Gu Y / Corbett KD
Funding support United States, 1 items
OrganizationGrant numberCountry
Howard Hughes Medical Institute (HHMI)Emerging Pathogens Initiative United States
CitationJournal: To Be Published
Title: Bacteriophage Goslar Baseplate
Authors: Basu D
History
DepositionMar 3, 2026-
Header (metadata) releaseAug 19, 2026-
Map releaseAug 19, 2026-
UpdateAug 19, 2026-
Current statusAug 19, 2026Processing site: RCSB / Status: Released

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Structure visualization

Supplemental images

emd_75829.png

Downloads & links

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Map

FileDownload / File: emd_75829.map.gz / Format: CCP4 / Size: 824 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Projections & slices

Image control

Size
Brightness
Contrast
Others
AxesZ (Sec.)Y (Row.)X (Col.)
1.87 Å/pix.
x 600 pix.
= 1120.2 Å		1.87 Å/pix.
x 600 pix.
= 1120.2 Å		1.87 Å/pix.
x 600 pix.
= 1120.2 Å

Surface

Projections

Slices (1/3)

Slices (1/2)

Slices (2/3)

Images are generated by Spider.

Voxel sizeX=Y=Z: 1.867 Å
Density

Histogram

Histogram (log scale)
Contour LevelBy AUTHOR: 0.4
Minimum - Maximum-1.1540114 - 2.4399168
Average (Standard dev.)-0.0019910561 (±0.10067059)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderXYZ
Origin000
Dimensions600600600
Spacing600600600
CellA=B=C: 1120.2 Å
α=β=γ: 90.0 °

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Supplemental data

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Half map: #2

Fileemd_75829_half_map_1.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

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Half map: #1

Fileemd_75829_half_map_2.map
Projections & Slices
AxesZYX

Projections

Slices (1/2)
Density Histograms

Histogram

Histogram (log scale)

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Sample components

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Entire : Goslarvirus

EntireName: Goslarvirus
Components
  • Virus: Goslarvirus
    • Protein or peptide: Tail Tube Initiator Protein gp62
    • Protein or peptide: Tail Tube of Bacteriophage Goslar
    • Protein or peptide: Virion structural protein
    • Protein or peptide: Tail sheath protein gp29 gp29PR domain-containing protein
    • Protein or peptide: Baseplate wedge protein
    • Protein or peptide: Virion structural protein
    • Protein or peptide: Inner baseplate protein gp202
    • Protein or peptide: Tail tube initiator complex protein gp203
    • Protein or peptide: Inner Baseplate Protein gp172
    • Protein or peptide: SH3 fold domain-containing protein
    • Protein or peptide: Inner Baseplate Protein gp180
    • Protein or peptide: Inner Baseplate Protein gp187

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Supramolecule #1: Goslarvirus

SupramoleculeName: Goslarvirus / type: virus / ID: 1 / Parent: 0 / Macromolecule list: all / NCBI-ID: 2733105 / Sci species name: Goslarvirus / Virus type: VIRION / Virus isolate: STRAIN / Virus enveloped: No / Virus empty: No
Host (natural)Organism: Escherichia coli (E. coli)

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Macromolecule #1: Tail Tube Initiator Protein gp62

MacromoleculeName: Tail Tube Initiator Protein gp62 / type: protein_or_peptide / ID: 1 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 46.241816 KDa
SequenceString: MSNYYDQAIQ TIQENNASLT PEAVEAAGNA VLFTDSDWAI ARKNIRTSVG QGTYEDSIAR RYRNVSPIPG NSPIPINRDH SGITFFTRP NLHLTDANLK RDRRLWSLRT DNPNSIQAVV RDYLDPVGAR KRNHRGRAIV DERNPFISIL TDNLTDISGF N DMEMQVYQ ...String:
MSNYYDQAIQ TIQENNASLT PEAVEAAGNA VLFTDSDWAI ARKNIRTSVG QGTYEDSIAR RYRNVSPIPG NSPIPINRDH SGITFFTRP NLHLTDANLK RDRRLWSLRT DNPNSIQAVV RDYLDPVGAR KRNHRGRAIV DERNPFISIL TDNLTDISGF N DMEMQVYQ GKPGLRQETV VMADGSVDMF QPYNLNATFK NIMGNPIMFL HYIWLIYIAG VHNGELTPSP QAIIDNEMDY WT RCYRIIL DPTGMYVRYI FAPTAMFPVG LPIGNMANYS IDKPFTQDNE RITIPYQAVG NNAFDEILKD EFNRLVLMFY YGE NDTRTF LEDEELVPIS PYERRIMSYR VDMYPFIHPL TSELLWFVPA DDYNEFYLDL EPSALPPDTF SRDLVRTTIP QNYE G

UniProtKB: Uncharacterized protein

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Macromolecule #2: Tail Tube of Bacteriophage Goslar

MacromoleculeName: Tail Tube of Bacteriophage Goslar / type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 32.990105 KDa
SequenceString: MRPDNTLLGE QGVGALSNAA MVDIRAGAQN GYISNIGTYV ANANYIPNQM FCLLLEAPRG FNYLPNPDVQ IGYLKALVEE VAHSITGLQ RGLEVEFVSV PVSGSGEIQE EVSDVKRPRS NPTFGIYEKE GRSVSYFLEQ WITYLLMDPD AKYPMLSSIV S TGGPTDLL ...String:
MRPDNTLLGE QGVGALSNAA MVDIRAGAQN GYISNIGTYV ANANYIPNQM FCLLLEAPRG FNYLPNPDVQ IGYLKALVEE VAHSITGLQ RGLEVEFVSV PVSGSGEIQE EVSDVKRPRS NPTFGIYEKE GRSVSYFLEQ WITYLLMDPD AKYPMLSSIV S TGGPTDLL ADYRSATMLF VEPDRQHKKV VNAWLCTNMM PHGTGDWTSR RNKNDAPNVV ELSIQFTALT QTNYGVRAFA QR LLDKMNL LKVNPDFRPA YLSDIDPAVA AQKVGYTFDF DNNDTFEVPN TYQNVTPRV

UniProtKB: Uncharacterized protein

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Macromolecule #3: Virion structural protein

MacromoleculeName: Virion structural protein / type: protein_or_peptide / ID: 3 / Number of copies: 2 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 32.893969 KDa
SequenceString: MASTQIRATD RIVRTIIGGQ VQTNLTLGLP HAWEEHSTLN EKLQIQSKVY PEGNPAVRYF CIGNQGHEFI RNANGIPSSM PIAHEASDL SPWKIKPFVM REVGNDLTTD ERAKFGLRRI ETLESGKKYI CYYGRRIDFD NVVRSMRYTK YVDGVAQTIE W HPTDKNLN ...String:
MASTQIRATD RIVRTIIGGQ VQTNLTLGLP HAWEEHSTLN EKLQIQSKVY PEGNPAVRYF CIGNQGHEFI RNANGIPSSM PIAHEASDL SPWKIKPFVM REVGNDLTTD ERAKFGLRRI ETLESGKKYI CYYGRRIDFD NVVRSMRYTK YVDGVAQTIE W HPTDKNLN PTRPDIPTTG ILVATGEYYD YSCKVSLVWT PWDINEYLNV AKLTEGGEEY AVISEIGMVS AGDKIVRADD GQ GSAFDMN EIVGAQVTDL ISTYHNLYTT NDTLTLKYDL GALEARKAGP TGAEILP

UniProtKB: Virion structural protein

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Macromolecule #4: Tail sheath protein gp29 gp29PR domain-containing protein

MacromoleculeName: Tail sheath protein gp29 gp29PR domain-containing protein
type: protein_or_peptide / ID: 4 / Number of copies: 3 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 76.777891 KDa
SequenceString: MRLKNSTPRA IFTGFKEGLT TDPVTAPEIT PIHLPYVFIQ GGRGKEDTLL LTGDALSTVY GEDMLNYRSK YASPATLIAR QAASTGSAI FTKRLVAPDA TAARIRIGVE VVADKLVVYQ RNADGSFVKD TLGNKIPDGD KTVDGLKMRW VVNHDKDAET P NAFGKDEV ...String:
MRLKNSTPRA IFTGFKEGLT TDPVTAPEIT PIHLPYVFIQ GGRGKEDTLL LTGDALSTVY GEDMLNYRSK YASPATLIAR QAASTGSAI FTKRLVAPDA TAARIRIGVE VVADKLVVYQ RNADGSFVKD TLGNKIPDGD KTVDGLKMRW VVNHDKDAET P NAFGKDEV VLGQLTATGG AQSNYYPILD GLVSWRGAEG DNIGIRLEAP TALSSNPTRT DIIERIGAFL YRIQFVERKS SR TAPTVIR TISGMEQETF ALQEGVIQPD DETDLSFGKV VVDAYEYNET GNTPIFAPMD QMHLYQKNID DVVKMLYESE RKV NNDLLT DVEFVEGQMN IFTGVDYNGI PYQTIEVLDA DQGGAIFDGT STFYAIDGSD GDVNWDTFDA LAKQQFESFG NMGE DLEDM AFYPFSIVYD IGYKVDTKKA MANVLSLRPD VMIIASTHTW KGVELNVDEE SSMGAMLRNY YRLHPESVLY NTPAC RAAV FMQYGESIEA PSLGKVPLTL EVANKLATYM GASDGVIRGT RIDNNPGNVV TTMRKINKTY RNATVRDRDW ENGLNY VQT YNRNSNFFPA WGTIYNNDRS VWRSLINVII GCDLTRVCYR LWAETTGTTG MDETLFLKLM GERFLEYTTG RYNDHVT VK GRFYLDKEDG YNGFSYHGDI SLIGDPGMTV GTFTITGLRR NTEAAEAA

UniProtKB: Tail sheath protein gp29 gp29PR domain-containing protein

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Macromolecule #5: Baseplate wedge protein

MacromoleculeName: Baseplate wedge protein / type: protein_or_peptide / ID: 5 / Number of copies: 2 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 112.287836 KDa
SequenceString: MSVTNKDLAE QLNRYMLSPI EMQAVASDMI RLASDGELTL VDPSCPFVYL LEVATATAAN QNARDESRVR ELYPKLATNW NQLYRWMYD ESYVGRFAMP GKTEIIYSLG YQEILDRAVE IPNTIASDDL SRSYSRKLVI PRTTAFTVAG MDFGLHYPIE I QVQAHDQI ...String:
MSVTNKDLAE QLNRYMLSPI EMQAVASDMI RLASDGELTL VDPSCPFVYL LEVATATAAN QNARDESRVR ELYPKLATNW NQLYRWMYD ESYVGRFAMP GKTEIIYSLG YQEILDRAVE IPNTIASDDL SRSYSRKLVI PRTTAFTVAG MDFGLHYPIE I QVQAHDQI RVVYNTDNIS PLQTLESNQV EYGVVRVKAG KVLVMRIPLF QFKTLVKDVP FNSVHGMNSS ITFEDQFYHC RA YMSSDND TWTEIATTHS QQIYDPLTPT IALQVEGNKL NWRVPEIYLS QGTMDKSTIR LEVLTTKGKI SVDPSDYDVT DWK DNYIDL SPKAEQKYSA PLSAFNIKGI YSEGALSGGR SALTFEEQRE RVMAGVNKTK VPITGTQVEL VLQDAGYGMV TTID NVTNR SFLATRDLPQ LSDSVPQAGS LMGSFYTSAA ALVKSKFVAD NGDRITIKPD CLYRDSNGSI TLLSDDEIDR INAGN SDAK LNAVNNAMLF YSPFHYVLDA TSDFDIHAYY LDAPKIGTQA FLDANETIPL TAMVTGYRLD RIAEGYRLSL IVEGND AWK ALDDKNVHIQ LGFNPRGEGD YATMLASPTT DEQGRRLFTF DITTNYDFTR ILADDSTAYE PYIALTSFSM YESTPRD YW ASLQQYLEIF HVVTDYAPED VDGILHSASD NYLVKKLTLQ NGYCFYRERL TATFGYDLDG LWMRSRTVAS EITYKRYT E NIPWVYDEDI PATDETGSVI IEPGDDGTLS VKYLHRKGDP KLNSDGSQAY RYLKGDIMKD NYGNPIPVDE REVLRNLDM FFIDASYLLA NDTDVIEYRN AIPTQLIEWI QNDIDTFRNF CYEETEISLY PKQSLGYVDV IVENGLETTL PAALSFNVTL YLPAKQYAD LDLRQVLQAM VSKVINECLT SRTVAKAEMI AMIREEGGDD ILNVEIDDFG PGKNLSVYTA KNDGVRCAVK K ELYVKADG ILSVREAIDV SFVKHAQSNS TALAQGLRV

UniProtKB: Baseplate wedge protein

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Macromolecule #6: Virion structural protein

MacromoleculeName: Virion structural protein / type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 93.934773 KDa
SequenceString: MSNTDYQLYS ESVQRLTDTL IIKSDITAER LNLKVSEVYQ MAVGDDPRTW LYYMNLAGEY HPCQTMMTVN SLDTLEEIEF TKENMLRHR MTAREYAYGG DYFNRLIARY PEQRMLILGI LNPIDIEKAI AARNHEILWY DTQEVESREA NLIPRLQQEI D DYFRRWEH ...String:
MSNTDYQLYS ESVQRLTDTL IIKSDITAER LNLKVSEVYQ MAVGDDPRTW LYYMNLAGEY HPCQTMMTVN SLDTLEEIEF TKENMLRHR MTAREYAYGG DYFNRLIARY PEQRMLILGI LNPIDIEKAI AARNHEILWY DTQEVESREA NLIPRLQQEI D DYFRRWEH PAYESVDMLH WPALYAILFT QIPEMIKGIR WENCHTHYAH SFHIWSYLAS HQGLDRFKRY MTESQMLWFY RN IAYVERN MGRTENYDKL IQKVLTDRGI PIGAFSIKQD ASEIPQTLKP AVYMERKPLN LQEIVGNGTV RRKVTTVMQQ QFP LARDNE AEYYTELNRT IEKMSMHDNN TLTTKVLESE AEDLTDSELY PKYDFLLNEW IHLSAIGMYQ SRLTTTNPVT GDTM TMSMK DAYKLFLYLL NYSMGMTLIE VPKIHANHVR VLTLPTFDHL RSITDPAIIP DKLIWWCLDK QVTLRAVVST EEFLT AVTE IYQGWRRHQF MYQLQEHYQA RGMAEAIVEN FYMDVGVDFG IGQLYKEWFL AMDWELDAIS QEEAGILALD IFTKAT GQD LEDVTSLKDI QYGMLQLLKT LSSYTIHFIQ TINSDPIKPL NKIAVRLGSS LVSGSEELWE DWAQANVHDT DNQATEV IK FVHDNNPMTN WRESAVESLE APPKPTWCDC SGYENTQTVR FSTQYWAQVI SDPISLRFRK NPLDGLWLAP FPGRAPRD L RERLPSESLR GLTVTPIKPF EQRFRKRDLQ GLWIEPIYKQ LNGRFRSVAL SETNHVAYKP ISMRLSNPLN RLIVKPLPI EDA

UniProtKB: Virion structural protein

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Macromolecule #7: Inner baseplate protein gp202

MacromoleculeName: Inner baseplate protein gp202 / type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 38.813621 KDa
SequenceString: MSLYDKLPSI DTSKIKTITS DFSTGRDTLL KAVSGTAVSA ADALTSFRSS ITNSINSTLS ALTGNLISIS DLNSFIDISG GKISLNENA LMNKIKDVTG LNISSTDNIL SQVKDQIYST INQQSNGALG KLIDKDGNVK LLDSLMSGDE YYKLSTIVDR Y LDDQGKTR ...String:
MSLYDKLPSI DTSKIKTITS DFSTGRDTLL KAVSGTAVSA ADALTSFRSS ITNSINSTLS ALTGNLISIS DLNSFIDISG GKISLNENA LMNKIKDVTG LNISSTDNIL SQVKDQIYST INQQSNGALG KLIDKDGNVK LLDSLMSGDE YYKLSTIVDR Y LDDQGKTR TEFSYNDYKT NRTVVTSLIR QAALAGNYID VRSLYDSGSA EDKVAMATTL AESLSSVGLN GDFRTAAVIT EL ITAERAR SVVPELITLL FRNYRIPSYI TLKEYDAEAS RLIDFADAFK PGWGKTNYHG NDAELLTMWM ETSSGFYSLF SRS RKYASL AVMGKNYTTT TTMAGLKKLY PDLPTVTLG

UniProtKB: Uncharacterized protein

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Macromolecule #8: Tail tube initiator complex protein gp203

MacromoleculeName: Tail tube initiator complex protein gp203 / type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 77.510961 KDa
SequenceString: MGILVQNALI TKQAFLLPGD SSTLSADMIK ARHTPYSYDN VDDTTLGGNW VLNPPPQYTK FADIKERRRA VMPGSTGMGR GYSESINSF KEVVTLRFGK PRFTGASIFF TDFYDADVAV TVKTGRDPGI LYYAAKAYTT VLSYLTPLPY LYMVGRIGRY F LGKPTSQY ...String:
MGILVQNALI TKQAFLLPGD SSTLSADMIK ARHTPYSYDN VDDTTLGGNW VLNPPPQYTK FADIKERRRA VMPGSTGMGR GYSESINSF KEVVTLRFGK PRFTGASIFF TDFYDADVAV TVKTGRDPGI LYYAAKAYTT VLSYLTPLPY LYMVGRIGRY F LGKPTSQY YYQVPTMHVY WASFQTLVNQ TAINMGLIAG AGKDKGYVEE GGTVLHQYSI GGQNVEEFIN YASKTLPGIY KK GGGIDIY QIATRRQRIQ NAWVRRIQSM MENDYSSYEE FWNDLDKRLD SGAFPSDVTG RTLTQYLADT QKSAVYSATA GDN KQTMDD LLFGRASYTN KDADANFNVS AATSDGGTST QSQGTTANVG NSTSGTTQAS TAASTAGGAN VQSKGIGQTN AAEE ATFLD LMDAELADGA QFISFRVDSV TSVTETFSNS ASESSIAQTM NSRAQANIER RFTLSGGNTG WAVLDEAIKA GSDLV NGAI SGMGLDGIFG AFMGSGFADI PKFYSGSSVS LPRADLTMEL RSWSGDRWSI FTNLMVPLLA ILAGGLPQAT GKSSYG MPF MCECYIPGKV QIKMGLIDNI TVTRHVGNVP STRERLPLGI DVSFSVYDLS SIVAMPITTT AASIAKLDPR GFLSDLL AD DTPLNNYLAV LSALTLTEQV YMIPDLSRRM HKTMADIDSF WSKGNFASWL SDTMPGRIAS GLLWKRTERP F

UniProtKB: Uncharacterized protein

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Macromolecule #9: Inner Baseplate Protein gp172

MacromoleculeName: Inner Baseplate Protein gp172 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 13.531216 KDa
SequenceString:
MSNTPLNDFL KTNPDDLIHD LDFRNVVEMH LEYFKNAGLV STIDIPPERA YEFDGNFYGL CRVLLGEGSE PMHWITLRLN GYRDPTEYT ADVLTMKIVD TSAINTLKQQ YRTIHYSA

UniProtKB: Uncharacterized protein

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Macromolecule #10: SH3 fold domain-containing protein

MacromoleculeName: SH3 fold domain-containing protein / type: protein_or_peptide / ID: 10 / Number of copies: 4 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 15.19113 KDa
SequenceString:
MPASDLEKIG SVVSFDVYAP ELGVNFNGVE ISAVYNYRTA VRNGRDVDAI HQQIYSRLPS SVPNDPTKYN YVEVITADGE YVILGIPWI KESTIVVTKT LIYKPSIVIE DATDVTKINQ ILNQAGYTKI VANDLINQ

UniProtKB: SH3 fold domain-containing protein

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Macromolecule #11: Inner Baseplate Protein gp180

MacromoleculeName: Inner Baseplate Protein gp180 / type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 15.230221 KDa
SequenceString:
MASNPLPGLS SFLTASGKKL DGLMTNFAIS NYSQSYCYQG SIVSLPYLIA TSQYSAPKLE DATYRMLYDY LMRYYDRVEL KVRVKYIDP TTERVDLQIG GIVTEKGISY DLGGVLRSER GNFIKWQEEV NEGAPN

UniProtKB: Uncharacterized protein

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Macromolecule #12: Inner Baseplate Protein gp187

MacromoleculeName: Inner Baseplate Protein gp187 / type: protein_or_peptide / ID: 12 / Number of copies: 2 / Enantiomer: LEVO
Source (natural)Organism: Goslarvirus
Molecular weightTheoretical: 22.928111 KDa
SequenceString: MAVTRMTPSP GAVGVFTVSA PFSVGTSTLY TVTALRRFSE VIGSGIDLFT ELYEPLSIDK STFEAHLEAN AYLVTLQPDY GAPVLVPDT YITSYPKNDS LRYRRIILGI DFGPLPPGLD LSYLTTILKG KASDILGVEP EVKTMEITLD DTVTQEQHQI N EARRQAAI ...String:
MAVTRMTPSP GAVGVFTVSA PFSVGTSTLY TVTALRRFSE VIGSGIDLFT ELYEPLSIDK STFEAHLEAN AYLVTLQPDY GAPVLVPDT YITSYPKNDS LRYRRIILGI DFGPLPPGLD LSYLTTILKG KASDILGVEP EVKTMEITLD DTVTQEQHQI N EARRQAAI KERDTIYARC ETQEKQITAL LATQKQLIKL LQDAGINPTP

UniProtKB: Uncharacterized protein

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Experimental details

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Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation statehelical array

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Sample preparation

BufferpH: 7.5
GridModel: Quantifoil / Support film - Material: CARBON / Support film - topology: LACEY / Support film - Film thickness: 2
VitrificationCryogen name: ETHANE / Chamber humidity: 95 % / Chamber temperature: 277 K / Instrument: FEI VITROBOT MARK II

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Electron microscopy

MicroscopeTFS KRIOS
Image recordingFilm or detector model: GATAN K3 BIOCONTINUUM (6k x 4k) / Average electron dose: 50.0 e/Å2
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD / Nominal defocus max: 2.0 µm / Nominal defocus min: 1.2 µm
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

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Image processing

CTF correctionType: PHASE FLIPPING AND AMPLITUDE CORRECTION
Startup modelType of model: INSILICO MODEL
Final reconstructionResolution.type: BY AUTHOR / Resolution: 3.88 Å / Resolution method: FSC 0.143 CUT-OFF / Software - Name: cryoSPARC (ver. 4.7.1) / Number images used: 31110
Initial angle assignmentType: MAXIMUM LIKELIHOOD
Final angle assignmentType: MAXIMUM LIKELIHOOD
FSC plot (resolution estimation)

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Atomic model buiding 1

Initial modelChain - Source name: AlphaFold / Chain - Initial model type: in silico model
Output model

PDB-11lx:
Bacteriophage Goslar Baseplate

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