ChemComp-6ZC: 4-nitrophenyl 2-acetamido-2-deoxy-alpha-D-glucopyranoside

Basic information

• Entry: Database: PDB chemical components / ID: 6ZC
• Name: Name: 4-nitrophenyl 2-acetamido-2-deoxy-alpha-D-glucopyranoside; Synonyms: N-[(2R,3R,4R,5S,6R)-6-(hydroxymethyl)-2-(4-nitrophenoxy)-4,5-bis(oxidanyl)oxan-3-yl]ethanamide; 4-nitrophenyl

Chemical information

Composition

Formula: C₁₄H₁₈N₂O₈ / Number of atoms: 42 / Formula weight: 342.301 / Formal charge: 0

Others

5ggl

PA1

Type: D-saccharide / PDB classification: ATOMS / Three letter code: 6ZC / Ideal coordinates details: Corina / Model coordinates PDB-ID: 5GGL / Parent comp.: PA1

History

Create component	Jul 29, 2016
Initial release	Aug 10, 2016
Other modification	Jul 3, 2020
Modify parent residue	Jul 17, 2020
Modify name	Jul 17, 2020
Modify synonyms	Jul 17, 2020
Modify internal type	Jul 17, 2020
Modify linking type	Jul 17, 2020
Modify atom id	Jul 17, 2020
Modify component atom id	Jul 17, 2020
Modify leaving atom flag	Jul 17, 2020

• External links: UniChem / ChemSpider / Brenda / ChEBI / ChemicalBook / Metabolights / PubChem / PubChem_TPharma / ZINC / Wikipedia search / Google search

Details

SMILES

• CACTVS 3.385: CC(=O)N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1Oc2ccc(cc2)[N+]([O-])=O
• OpenEye OEToolkits 2.0.5: CC(=O)NC1C(C(C(OC1Oc2ccc(cc2)[N+](=O)[O-])CO)O)O

SMILES CANONICAL

• CACTVS 3.385: CC(=O)N[C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@@H]1Oc2ccc(cc2)[N+]([O-])=O
• OpenEye OEToolkits 2.0.5: CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@@H]1Oc2ccc(cc2)[N+](=O)[O-])CO)O)O

InChI

• InChI 1.03: InChI=1S/C14H18N2O8/c1-7(18)15-11-13(20)12(19)10(6-17)24-14(11)23-9-4-2-8(3-5-9)16(21)22/h2-5,10-14,17,19-20H,6H2,1H3,(H,15,18)/t10-,11-,12-,13-,14+/m1/s1

InChIKey

• InChI 1.03: OMRLTNCLYHKQCK-KSTCHIGDSA-N

PDB entries

Showing all 1 items

PDB-5ggl:
Crystal structure of N-terminal domain of human protein O-mannose beta-1,2-N-acetylglucosaminyltransferase in complex with GlcNAc-alpha-pNP