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- ChemComp-1GN: 2-amino-2-deoxy-beta-D-galactopyranose -

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Basic information

EntryDatabase: PDB chemical components / ID: 1GN
NameName: 2-amino-2-deoxy-beta-D-galactopyranose
Synonyms: beta-D-galactosamine; 2-amino-2-deoxy-beta-D-galactose; 2-amino-2-deoxy-D-galactose; 2-amino-2-deoxy-galactose;

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Chemical information

Composition
Formula: C6H13NO5 / Number of atoms: 25 / Formula weight: 179.171 / Formal charge: 0
Others

3gal

Type: D-saccharide, beta linking / PDB classification: ATOMS / Three letter code: 1GN / Model coordinates PDB-ID: 3GAL
History
Create componentJul 8, 1999
Modify descriptorJun 4, 2011
Other modificationAug 12, 2019
Other modificationDec 19, 2019
Other modificationJul 3, 2020
Modify nameJul 17, 2020
Modify synonymsJul 17, 2020
External linksUniChem / ChemSpider / ChEBI / DrugBank / Metabolights / Nikkaji / PubChem / SureChEMBL / ZINC / Wikipedia search / Google search

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Details

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SMILES

ACDLabs 10.04OC1C(O)C(OC(O)C1N)CO
CACTVS 3.341N[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)N)O)O)O

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SMILES CANONICAL

CACTVS 3.341N[C@H]1[C@H](O)O[C@H](CO)[C@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)N)O)O)O

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InChI

InChI 1.03InChI=1S/C6H13NO5/c7-3-5(10)4(9)2(1-8)12-6(3)11/h2-6,8-11H,1,7H2/t2-,3-,4+,5-,6-/m1/s1

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InChIKey

InChI 1.03MSWZFWKMSRAUBD-VFUOTHLCSA-N

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SYSTEMATIC NAME

ACDLabs 10.042-amino-2-deoxy-beta-D-galactopyranose
OpenEye OEToolkits 1.5.0(2R,3R,4R,5R,6R)-3-amino-6-(hydroxymethyl)oxane-2,4,5-triol

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CONDENSED IUPAC CARBOHYDRATE SYMBOL

GMML 1.0DGalpNb

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COMMON NAME

GMML 1.0b-D-galactopyranosamine

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IUPAC CARBOHYDRATE SYMBOL

PDB-CARE 1.0b-D-GalpN

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SNFG CARBOHYDRATE SYMBOL

GMML 1.0GalN

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PDB entries

Showing all 1 items

PDB-3gal:
CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH GALACTOSAMINE

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