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Structure paper

TitleNanoscale Direct-to-Biology Optimization and Structural Insights into Selective S. aureus TrmD Inhibitors.
Journal, issue, pagesJ. Med. Chem., Vol. 68, Page 26246-26262, Year 2025
Publish dateAug 14, 2025 (structure data deposition date)
AuthorsHubner, A.F. / Weldert, A.C. / Marciniak, T. / Hof, F. / Beck, V.S. / Carien, S. / Mulartschyk, S.N. / Wolf, E. / Ziebuhr, W. / Barthels, F.
External linksJ. Med. Chem. / PubMed:41367353
MethodsX-ray diffraction
Resolution2.5 - 2.6 Å
Structure data

PDB-9sdv:
tRNA (guanine-7-)-methyltransferase (trmD) from Staphylococcus aureus in complex with SAM-competitive compound
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-9sdw:
tRNA (guanine-7-)-methyltransferase (trmD) from Staphylococcus aureus in complex with SAM-competitive compound
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-21X:
N-[4-(aminomethyl)benzyl]-4-oxo-3,4-dihydrothieno[2,3-d]pyrimidine-5-carboxamide

ChemComp-HOH:
WATER

PDB-1jng:
Unknown entry

Source
  • staphylococcus aureus (bacteria)
KeywordsTRANSFERASE / TrmD / Inhibitor / m7G / S. aureus

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