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TitleStructures of folding intermediates on BAM show diverse substrates fold by a uniform mechanism.
Journal, issue, pagesbioRxiv, Year 2025
Publish dateOct 17, 2025
AuthorsBenjamin D Thomson / Melissa D Marquez / Shaun Rawson / Thiago M A Dos Santos / Stephen C Harrison / Daniel Kahne
PubMed AbstractThe outer membranes of mitochondria, chloroplasts, and Gram-negative bacteria contain β-barrel membrane proteins that are assembled by conserved multi-subunit machines. In bacteria, the β-barrel ...The outer membranes of mitochondria, chloroplasts, and Gram-negative bacteria contain β-barrel membrane proteins that are assembled by conserved multi-subunit machines. In bacteria, the β-barrel assembly machine (BAM) folds over a hundred compositionally different substrates into barrels that vary greatly in size. Some larger barrels require globular proteins to plug the barrel lumen. How a single machine can assemble such different barrels is unknown. Here we report three structures representing progressively folded stages of a 16-stranded barrel engaged with BAM, as well as the structure of a late-stage folding intermediate of a 26-stranded substrate folding around its soluble lipoprotein plug on BAM. We find that BAM catalyzes folding of these substrates by a uniform mechanism in which BAM undergoes major distortions to accommodate the nascent barrel.
External linksbioRxiv / PubMed:41280068 / PubMed Central
MethodsEM (single particle)
Resolution3.3 - 3.9 Å
Structure data

EMDB-48251: Consensus refinement of the barrel region of beta-barrel assembly machine from Escherichia coli in an late state of substrate assembly
Method: EM (single particle) / Resolution: 3.9 Å

EMDB-48253, PDB-9mge:
beta-barrel assembly machine from Escherichia coli in an early state of substrate assembly
Method: EM (single particle) / Resolution: 3.6 Å

EMDB-48254, PDB-9mgf:
beta-barrel assembly machine from Escherichia coli in a middle state of substrate assembly
Method: EM (single particle) / Resolution: 3.3 Å

EMDB-48255, PDB-9mgg:
beta-barrel assembly machine from Escherichia coli in a late state of substrate assembly
Method: EM (single particle) / Resolution: 3.9 Å

Source
  • escherichia coli k-12 (bacteria)
KeywordsMEMBRANE PROTEIN / beta-barrel assembly machine / outer membrane / folding intermediate

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