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TitleStructural dynamics and permeability of the TRPV3 pentamer.
Journal, issue, pagesNat Commun, Vol. 16, Issue 1, Page 4520, Year 2025
Publish dateMay 15, 2025
AuthorsShifra Lansky / Zhaokun Wang / Oliver B Clarke / Christophe Chipot / Simon Scheuring /
PubMed AbstractTRPV3 belongs to the large superfamily of tetrameric transient receptor potential (TRP) ion channels. Recently, using high-speed atomic force microscopy (HS-AFM), we discovered a rare and transient ...TRPV3 belongs to the large superfamily of tetrameric transient receptor potential (TRP) ion channels. Recently, using high-speed atomic force microscopy (HS-AFM), we discovered a rare and transient pentameric state for TRPV3 that is in equilibrium with the tetrameric state, and, using cryo-EM, we solved a low-resolution structure of the TRPV3 pentamer, in which, however, many residues were unresolved. Here, we present a higher resolution and more complete structure of the pentamer, revealing a domain-swapped architecture, a collapsed vanilloid binding site, and a large pore. Molecular dynamics simulations and potential of mean force calculations of the pentamer establish high protein dynamics and permeability to large cations. Subunit interface analysis, together with thermal denaturation experiments, led us to propose a molecular mechanism of the tetramer-to-pentamer transition, backed experimentally by HS-AFM observations. Collectively, our data demonstrate that the TRPV3 pentamer is in a hyper-activated state with unique, highly permissive permeation properties.
External linksNat Commun / PubMed:40374654 / PubMed Central
MethodsEM (single particle)
Resolution4.07 Å
Structure data

EMDB-46907, PDB-9dij:
4 Angstrom structure of the human TRPV3 pentamer
Method: EM (single particle) / Resolution: 4.07 Å

Source
  • homo sapiens (human)
KeywordsMEMBRANE PROTEIN / Ion channel / transient receptor potential channel / alternative oligomeric state / pore dilation

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