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TitleA model for drug transport across two membranes of Gram-negative bacteria by an MFS tripartite assembly.
Journal, issue, pagesNat Commun, Vol. 17, Issue 1, Year 2026
Publish dateMar 16, 2026
AuthorsZhaojun Zhong / Tuerxunjiang Maimaiti / Matthew L Jackson / Rui Dong / Xueyan Gao / Qing Ouyang / Wenqian Wang / Jinliang Guo / Shangrong Li / Wenyu Shang / Huajun Liu / Hongnian Jiang / Shuo Zhang / Ulrich Zachariae / Ben F Luisi / Yanjie Chao / Dijun Du /
PubMed AbstractTransport of proteins and small molecules across cellular membrane is crucial for bacterial interaction with the environment and survival against antibiotics. In Gram-negative bacteria that possess ...Transport of proteins and small molecules across cellular membrane is crucial for bacterial interaction with the environment and survival against antibiotics. In Gram-negative bacteria that possess two layers of membranes, specialized macromolecular machines are required to transport substrates across the cell envelope, often via an indirect stepwise process. The major facilitator superfamily (MFS)-type tripartite efflux pumps use proton electrochemical gradient to extrude drugs in diverse bacterial species, but the architecture of the assembly and structural mechanisms remain elusive. A representative MFS-type tripartite efflux pump, EmrAB-TolC, mediates resistance to multiple antimicrobial drugs through proton-coupled EmrB, a member of the DHA2 transporter family. Here, we report the high-resolution (3.13 Å) structure of the EmrAB-TolC pump, revealing a distinct, asymmetric architecture emerging from the assembly of TolC:EmrA:EmrB with a ratio of 3:6:1 and contacts that are essential for the pump assembly. Key residues involved in drug transport are identified and corroborated by mutagenesis and antibiotic sensitivity assays. The structural and functional data support a model for one-step drug transport by the MFS pump across the entire envelope of Gram-negative bacteria.
External linksNat Commun / PubMed:41839863 / PubMed Central
MethodsEM (single particle)
Resolution3.11 - 3.59 Å
Structure data

EMDB-39879, PDB-8zal:
EmrAB-TolC MFS-type tripartite multidrug efflux pump EA
Method: EM (single particle) / Resolution: 3.11 Å

EMDB-39885, PDB-8zar:
EmrAB-TolC MFS-type tripartite multidrug efflux pump FA
Method: EM (single particle) / Resolution: 3.59 Å

Source
  • escherichia coli k-12 (bacteria)
KeywordsSTRUCTURAL PROTEIN / Multidrug efflux pump / MFS / EmrAB

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