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Structure paper

TitleDeviated binding of anti-HBV nucleoside analog E-CFCP-TP to the reverse transcriptase active site attenuates the effect of drug-resistant mutations.
Journal, issue, pagesSci Rep, Vol. 14, Page 15742-15742, Year 2024
Publish dateNov 9, 2023 (structure data deposition date)
AuthorsYasutake, Y. / Hattori, S.I. / Kumamoto, H. / Tamura, N. / Maeda, K. / Mitsuya, H.
External linksSci Rep / PubMed:38977798
MethodsX-ray diffraction
Resolution2.31 - 2.7 Å
Structure data

PDB-8x1z:
HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y:DNA:E-CFCP-TP ternary complex
Method: X-RAY DIFFRACTION / Resolution: 2.62 Å

PDB-8x20:
HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:E-CFCP-TP ternary complex
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-8x21:
HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:ETV-TP ternary complex
Method: X-RAY DIFFRACTION / Resolution: 2.33 Å

PDB-8x22:
HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/L74V:DNA:dGTP ternary complex
Method: X-RAY DIFFRACTION / Resolution: 2.31 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-MG:
Unknown entry


ChemComp, No image

ChemComp-XTE:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-ET9:
[[(1R,3S,5S)-3-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-2-methylidene-5-oxidanyl-cyclopentyl]methoxy-oxidanyl-phosphory

ChemComp-DGT:
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE

Source
  • human immunodeficiency virus 1
  • synthetic construct (others)
KeywordsTRANSFERASE / reverse transcriptase / HIV-1 / HBV / drug resistance / nucleoside analogue / E-CFCP / entecavir

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