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Structure paper

TitleMolecular mechanism of thiocyanate dehydrogenase at atomic resolution.
Journal, issue, pagesInt. J. Biol. Macromol., Vol. 279, Page 135058-135058, Year 2024
Publish dateAug 22, 2023 (structure data deposition date)
AuthorsVarfolomeeva, L.A. / Shipkov, N.S. / Dergousova, N.I. / Boyko, K.M. / Khrenova, M.G. / Tikhonova, T.V. / Popov, V.O.
External linksInt. J. Biol. Macromol. / PubMed:39191340
MethodsX-ray diffraction
Resolution1.05 - 1.8 Å
Structure data

PDB-8q9x:
The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum with molecular oxygen at 1.05 A resolution
Method: X-RAY DIFFRACTION / Resolution: 1.05 Å

PDB-8q9y:
The structure of thiocyanate dehydrogenase from Pelomicrobium methylotrophicum in complex with inhibitor thiourea at 1.10 A resolution
Method: X-RAY DIFFRACTION / Resolution: 1.1 Å

PDB-8you:
The pmTcDH complex structure with an inhibitor SeCN
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-OXY:
OXYGEN MOLECULE

ChemComp-CU:
COPPER (II) ION

ChemComp-HOH:
WATER

ChemComp-TOU:
THIOUREA

ChemComp-SEK:
SELENOCYANATE ION

ChemComp-SE:
SELENIUM ATOM

ChemComp-NA:
Unknown entry

Source
  • pelomicrobium methylotrophicum (bacteria)
KeywordsOXIDOREDUCTASE / Thiocyanate dehydrogenase / copper enzyme / trinuclear copper center / atomic resolution / conformational changes / complex with molecular oxygen / Pelomicrobium methylotrophicum / complex with inhibitor / thiourea / Substrate analogue / Inhibitor / Complex / TcDH / selenocyanate / SeCN

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