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TitleDesign of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Journal, issue, pagesNat. Chem., Vol. 15, Page 1591-1598, Year 2023
Publish dateFeb 21, 2023 (structure data deposition date)
AuthorsKosugi, T. / Iida, T. / Tanabe, M. / Iino, R. / Koga, N.
External linksNat. Chem. / PubMed:37414880
MethodsX-ray diffraction
Resolution2.77 - 4.2 Å
Structure data

PDB-8igu:
Hexameric Ring Complex of Engineered V1-ATPase: A3(De)3_empty
Method: X-RAY DIFFRACTION / Resolution: 2.77 Å

PDB-8igv:
Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP-Pi)1cat(ADP)2cat,2non-cat
Method: X-RAY DIFFRACTION / Resolution: 3.15 Å

PDB-8igw:
Hexameric Ring Complex of Engineered V1-ATPase bound to 4 ADPs: A3(De)3_(ADP)3cat,1non-cat, Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP)3cat,2non-cat
Method: X-RAY DIFFRACTION / Resolution: 4.2 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-MG:
Unknown entry

ChemComp-PO4:
PHOSPHATE ION

Source
  • enterococcus hirae atcc 9790 (bacteria)
KeywordsMOTOR PROTEIN / Computational Design / Rotary Molecular Motor / Complex

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