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TitleCD19 CAR antigen engagement mechanisms and affinity tuning.
Journal, issue, pagesSci Immunol, Vol. 8, Issue 81, Page eadf1426, Year 2023
Publish dateMar 10, 2023
AuthorsChanghao He / Jorge Mansilla-Soto / Nandish Khanra / Mohamad Hamieh / Victor Bustos / Alice J Paquette / Andreina Garcia Angus / Derek M Shore / William J Rice / George Khelashvili / Michel Sadelain / Joel R Meyerson /
PubMed AbstractChimeric antigen receptor (CAR) T cell therapy relies on T cells that are guided by synthetic receptors to target and lyse cancer cells. CARs bind to cell surface antigens through an scFv (binder), ...Chimeric antigen receptor (CAR) T cell therapy relies on T cells that are guided by synthetic receptors to target and lyse cancer cells. CARs bind to cell surface antigens through an scFv (binder), the affinity of which is central to determining CAR T cell function and therapeutic success. CAR T cells targeting CD19 were the first to achieve marked clinical responses in patients with relapsed/refractory B cell malignancies and to be approved by the U.S. Food and Drug Administration (FDA). We report cryo-EM structures of CD19 antigen with the binder FMC63, which is used in four FDA-approved CAR T cell therapies (Kymriah, Yescarta, Tecartus, and Breyanzi), and the binder SJ25C1, which has also been used extensively in multiple clinical trials. We used these structures for molecular dynamics simulations, which guided creation of lower- or higher-affinity binders, and ultimately produced CAR T cells endowed with distinct tumor recognition sensitivities. The CAR T cells exhibited different antigen density requirements to trigger cytolysis and differed in their propensity to prompt trogocytosis upon contacting tumor cells. Our work shows how structural information can be applied to tune CAR T cell performance to specific target antigen densities.
External linksSci Immunol / PubMed:36867678 / PubMed Central
MethodsEM (single particle)
Resolution3.05 - 3.4 Å
Structure data

EMDB-26719, PDB-7urv:
FMC63 scFv in complex with soluble CD19
Method: EM (single particle) / Resolution: 3.05 Å

EMDB-26720, PDB-7urx:
SJ25C1 Fab in complex with soluble CD19
Method: EM (single particle) / Resolution: 3.4 Å

Source
  • homo sapiens (human)
  • mus musculus (house mouse)
KeywordsPROTEIN BINDING / Complex / CAR-T

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