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Structure paper

TitleDiscovery, structure and mechanism of a tetraether lipid synthase.
Journal, issue, pagesNature, Vol. 609, Page 197-203, Year 2022
Publish dateJan 24, 2022 (structure data deposition date)
AuthorsLloyd, C.T. / Iwig, D.F. / Wang, B. / Cossu, M. / Metcalf, W.W. / Boal, A.K. / Booker, S.J.
External linksNature / PubMed:35882349
MethodsX-ray diffraction
Resolution1.85 - 2.03 Å
Structure data

PDB-7tol:
X-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (GDGT-MAS) from Methanocaldococcus jannaschii with archaeal lipid, 5'deoxyadenosine, and methionine bound
Method: X-RAY DIFFRACTION / Resolution: 2.03 Å

PDB-7tom:
X-ray crystal structure of glycerol dibiphytanyl glycerol tetraether - macrocyclic archaeol synthase (GDGT-MAS) from Methanocaldococcus jannaschii with bacterial lipid substrate analog, 5'deoxyadenosine, and methionine bound
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

Chemicals

ChemComp-FE:
Unknown entry

ChemComp-SF4:
IRON/SULFUR CLUSTER

ChemComp-5AD:
5'-DEOXYADENOSINE

ChemComp-MET:
METHIONINE

ChemComp-L1P:
3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-L4P:
3-[GLYCEROLYLPHOSPHONYL]-[1,2-DI-PHYTANYL]GLYCEROL

ChemComp-HOH:
WATER

ChemComp-SCN:
THIOCYANATE ION

ChemComp-LPP:
2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE / phospholipid*YM

Source
  • methanocaldococcus jannaschii (archaea)
KeywordsOXIDOREDUCTASE / Radical SAM Enzyme / Biphytanyl Chain / Glycerol dibiphytanyl glycerol tetraether / Archaeal Lipid modification / [4Fe-4S] cluster / Rubredoxin

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