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TitleInteractions of 2,6-substituted purines with purine nucleoside phosphorylase from Helicobacter pylori in solution and in the crystal, and the effects of these compounds on cell cultures of this bacterium.
Journal, issue, pagesJ Enzyme Inhib Med Chem, Vol. 37, Page 1083-1097, Year 2022
Publish dateMay 28, 2021 (structure data deposition date)
AuthorsNarczyk, M. / Wojtys, M.I. / Lescic Asler, I. / Zinic, B. / Luic, M. / Jagusztyn-Krynicka, E.K. / Stefanic, Z. / Bzowska, A.
External linksJ Enzyme Inhib Med Chem / PubMed:35437103
MethodsX-ray diffraction
Resolution1.5 - 2 Å
Structure data

PDB-7ooy:
Purine nucleoside phosphorylase(DeoD-type) from H. pylori with 6-benzylthio-2-chloropurine
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-7ooz:
Purine nucleoside phosphorylase(DeoD-type) from H. pylori with 6-benzyloxo-2-chloropurine
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-7op9:
Purine nucleoside phosphorylase(DeoD-type) from H. pylori with 2,6-dichloropurine
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-7opa:
Purine nucleoside phosphorylase(DeoD-type) from H. pylori with 6-benzylthiopurine
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-PO4:
PHOSPHATE ION

ChemComp-05Z:
6-benzylthio-2-chloropurine

ChemComp-HOH:
WATER

ChemComp-MG:
Unknown entry

ChemComp-05Q:
6-benzyloxo-2-chloropurine

ChemComp-06K:
2,6-bis(chloranyl)-7H-purine

ChemComp-IMD:
IMIDAZOLE

Source
  • helicobacter pylori (strain atcc 700392 / 26695) (bacteria)
KeywordsTRANSFERASE / inhibitor / complex

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