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TitleHigh-resolution crystal structures of transient intermediates in the phytochrome photocycle.
Journal, issue, pagesStructure, Vol. 29, Page 743-754.e4, Year 2021
Publish dateAug 11, 2020 (structure data deposition date)
AuthorsCarrillo, M. / Pandey, S. / Sanchez, J. / Noda, M. / Poudyal, I. / Aldama, L. / Malla, T.N. / Claesson, E. / Wahlgren, W.Y. / Feliz, D. ...Carrillo, M. / Pandey, S. / Sanchez, J. / Noda, M. / Poudyal, I. / Aldama, L. / Malla, T.N. / Claesson, E. / Wahlgren, W.Y. / Feliz, D. / Srajer, V. / Maj, M. / Castillon, L. / Iwata, S. / Nango, E. / Tanaka, R. / Tanaka, T. / Fangjia, L. / Tono, K. / Owada, S. / Westenhoff, S. / Stojkovic, E.A. / Schmidt, M.
External linksStructure / PubMed:33756101
MethodsX-ray diffraction
Resolution2.4 Å
Structure data

PDB-7jr5:
Real Time Reaction Intermediates in Stigmatella Bacteriophytochrome P2
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-7jri:
High-resolution Crystal Structures of Transient Intermediates in the Phytochrome Photocycle, 33 ms structure
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

Chemicals

ChemComp-VHG:
3-[2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-5-[[(3~{S})-4-ethyl-3-methyl-2-oxidanylidene-1,3-dihydropyrrol-5-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid

ChemComp-BEN:
BENZAMIDINE

ChemComp-HOH:
WATER

ChemComp-3Q8:
3-[2-[[5-[[(3E,4S)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrol-2-yl]methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid

Source
  • stigmatella aurantiaca (strain dw4/3-1) (bacteria)
  • stigmatella aurantiaca (bacteria)
KeywordsSIGNALING PROTEIN / phytochrome / photosensory core domain / time-resolved serial femtosecond crystallography / nanosecond / red/far-red / Z to E isomerization / light perception / red light receptor

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