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Structure paper

TitleA backbone-centred energy function of neural networks for protein design.
Journal, issue, pagesNature, Vol. 602, Page 523-528, Year 2022
Publish dateNov 12, 2020 (structure data deposition date)
AuthorsHuang, B. / Xu, Y. / Hu, X. / Liu, Y. / Liao, S. / Zhang, J. / Huang, C. / Hong, J. / Chen, Q. / Liu, H.
External linksNature / PubMed:35140398
MethodsX-ray diffraction
Resolution1.35 - 2.85 Å
Structure data

PDB-7dgu:
De novo designed protein H4A1R
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-7dgw:
De novo designed protein H4A2S
Method: X-RAY DIFFRACTION / Resolution: 1.35 Å

PDB-7dgy:
De novo designed protein H4C2R
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-7dkk:
De novo design protein XM2H
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-7dko:
De novo design protein AM2M
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-7dmf:
A de novo protein that rigidly extends the structure of tVHS-like domain in tepsin with a new designed domain
Method: X-RAY DIFFRACTION / Resolution: 2.201 Å

PDB-7fbb:
De novo design protein D12 with MBP tag
Method: X-RAY DIFFRACTION / Resolution: 2.307 Å

PDB-7fbc:
De novo design protein D22 with MBP tag
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-7fbd:
De novo design protein D53 with MBP tag
Method: X-RAY DIFFRACTION / Resolution: 2.85 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM

Source
  • escherichia coli 'bl21-gold(de3)plyss ag' (bacteria)
  • synthetic construct (others)
  • serratia sp. (strain fs14) (bacteria)
KeywordsDE NOVO PROTEIN / Designed protein / Monomer / Ferredoxin-like / all helix / UNKNOWN FUNCTION

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