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Structure paper

TitleInhibitory mechanism of reveromycin A at the tRNA binding site of a class I synthetase.
Journal, issue, pagesNat Commun, Vol. 12, Page 1616-1616, Year 2021
Publish dateSep 25, 2020 (structure data deposition date)
AuthorsChen, B. / Luo, S. / Zhang, S. / Ju, Y. / Gu, Q. / Xu, J. / Yang, X.L. / Zhou, H.
External linksNat Commun / PubMed:33712620
MethodsX-ray diffraction
Resolution1.895 Å
Structure data

PDB-7d5c:
IleRS in complex with a tRNA site inhibitor
Method: X-RAY DIFFRACTION / Resolution: 1.895 Å

Chemicals

ChemComp-GVU:
(2E,4S,5S,6E,8E)-10-[(2S,3R,6S,8R,9S)-3-butyl-9-methyl-2-[(1E,3E)-3-methyl-5-oxidanyl-5-oxidanylidene-penta-1,3-dienyl]-3-(4-oxidanyl-4-oxidanylidene-butanoyl)oxy-1,7-dioxaspiro[5.5]undecan-8-yl]-4,8-dimethyl-5-oxidanyl-deca-2,6,8-trienoic acid

ChemComp-GV6:
[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (2S,3S)-2-azanyl-3-methyl-pentanoate

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

Source
  • saccharomyces cerevisiae s288c (yeast)
KeywordsLIGASE/INHIBITOR / tRNA synthetase / ligase-inhibitor complex

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