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Structure paper

TitleStructural and biochemical studies of the glucuronoyl esteraseOtCE15A illuminate its interaction with lignocellulosic components.
Journal, issue, pagesJ. Biol. Chem., Vol. 294, Page 19978-19987, Year 2019
Publish dateOct 1, 2019 (structure data deposition date)
AuthorsMazurkewich, S. / Poulsen, J.N. / Lo Leggio, L. / Larsbrink, J.
External linksJ. Biol. Chem. / PubMed:31740581
MethodsX-ray diffraction
Resolution1.12 - 2.2 Å
Structure data

PDB-6syr:
The wild type glucuronoyl esterase OtCE15A from Opitutus terrae in complex with D-glucuronate
Method: X-RAY DIFFRACTION / Resolution: 1.49 Å

PDB-6syu:
The wild type glucuronoyl esterase OtCE15A from Opitutus terrae in complex with xylobiose
Method: X-RAY DIFFRACTION / Resolution: 1.33 Å

PDB-6syv:
The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with D-glucuronate
Method: X-RAY DIFFRACTION / Resolution: 1.12 Å

PDB-6sz0:
The glucuronoyl esterase OtCE15A H408A variant from Opitutus terrae
Method: X-RAY DIFFRACTION / Resolution: 1.74 Å

PDB-6sz4:
The glucuronoyl esterase OtCE15A H408A variant from Opitutus terrae in complex with, and covalently linked to, D-glucuronate
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-6szo:
The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with D-galacturonate
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-6t0e:
The glucuronoyl esterase OtCE15A S267A variant from Opitutus terrae in complex with benzyl D-glucuronoate and D-glucuronate
Method: X-RAY DIFFRACTION / Resolution: 1.89 Å

PDB-6t0i:
The wild type glucuronoyl esterase OtCE15A from Opitutus terrae in complex with the aldotetrauronic acid XUX
Method: X-RAY DIFFRACTION / Resolution: 1.53 Å

Chemicals

ChemComp-GCU:
alpha-D-glucopyranuronic acid

ChemComp-MG:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-BDP:
beta-D-glucopyranuronic acid

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-SO4:
SULFATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-FMT:
FORMIC ACID

ChemComp-GTR:
beta-D-galactopyranuronic acid

ChemComp-DMS:
DIMETHYL SULFOXIDE / DMSO, precipitant*YM

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-CL:
Unknown entry

ChemComp-M55:
benzyl alpha-D-glucopyranuronate

ChemComp-TMO:
trimethylamine oxide

ChemComp-K:
Unknown entry

Source
  • opitutus terrae pb90-1 (bacteria)
  • opitutus terrae (bacteria)
  • opitutus terrae (strain dsm 11246 / jcm 15787 / pb90-1) (bacteria)
KeywordsHYDROLASE / Esterase / Complex / Biomass

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