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Structure paper

TitleMolecular basis for DNA repair synthesis on short gaps by mycobacterial Primase-Polymerase C.
Journal, issue, pagesNat Commun, Vol. 11, Page 4196-4196, Year 2020
Publish dateJul 15, 2019 (structure data deposition date)
AuthorsBrissett, N.C. / Zabrady, K. / Plocinski, P. / Bianchi, J. / Korycka-Machala, M. / Brzostek, A. / Dziadek, J. / Doherty, A.J.
External linksNat Commun / PubMed:32826907
MethodsX-ray diffraction
Resolution2.01 - 2.209 Å
Structure data

PDB-6sa0:
Ternary complex of Prim-PolC from Mycobacterium smegmatis with 2nt gapped DNA and UpNHpp
Method: X-RAY DIFFRACTION / Resolution: 2.209 Å

PDB-6sa1:
Post catalytic complex of Prim-PolC from Mycobacterium smegmatis with gapped DNA and 3'-dUTP
Method: X-RAY DIFFRACTION / Resolution: 2.01 Å

Chemicals

ChemComp-2KH:
5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine

ChemComp-MN:
Unknown entry

ChemComp-CAC:
CACODYLATE ION

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-U3H:
3'-DEOXY-URIDINE 5'-TRIPHOSPHATE

ChemComp-SO4:
SULFATE ION

ChemComp-MG:
Unknown entry

ChemComp-PPV:
PYROPHOSPHATE

Source
  • mycolicibacterium smegmatis mc2 155 (bacteria)
  • synthetic construct (others)
KeywordsTRANSFERASE / Nucleotidyl transferase / Polymerase / Base excision repair / Protein-DNA complex

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