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Structure paper

TitleSequence-Selective Minor Groove Recognition of a DNA Duplex Containing Synthetic Genetic Components.
Journal, issue, pagesJ. Am. Chem. Soc., Vol. 141, Page 9555-9563, Year 2019
Publish dateNov 10, 2018 (structure data deposition date)
AuthorsPadroni, G. / Withers, J.M. / Taladriz-Sender, A. / Reichenbach, L.F. / Parkinson, J.A. / Burley, G.A.
External linksJ. Am. Chem. Soc. / PubMed:31117639
MethodsNMR (solution)
Structure data

PDB-6i4n:
Dodecamer DNA containing the synthetic base pair P-Z in complex with a pyrrole-imidazole polyamide
Method: SOLUTION NMR

PDB-6i4o:
Dodecamer DNA containing the synthetic base pair P-Z
Method: SOLUTION NMR

PDB-6rio:
Imidazole Polyamide-DNA complex NMR structure (5'-CGATGTACATCG-3')
Method: SOLUTION NMR

Chemicals

ChemComp-K4Z:
3-[3-[[4-[[4-[[4-[[4-[[(2~{R})-2-azaniumyl-4-[[1-methyl-4-[[1-methyl-4-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]butanoyl]amino]-1-methyl-imidazol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]propanoylamino]propyl-dimethyl-azanium

Source
  • synthetic construct (others)
KeywordsDNA / synthetic base pair / Z / P / pyrrole-imidazole polyamide / Polyamide / Minor groove binder

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