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Structure paper

TitleA New Microbial Pathway for Organophosphonate Degradation Catalyzed by Two Previously Misannotated Non-Heme-Iron Oxygenases.
Journal, issue, pagesBiochemistry, Vol. 58, Page 1627-1647, Year 2019
Publish dateJan 17, 2019 (structure data deposition date)
AuthorsRajakovich, L.J. / Pandelia, M.E. / Mitchell, A.J. / Chang, W.C. / Zhang, B. / Boal, A.K. / Krebs, C. / Bollinger Jr., J.M.
External linksBiochemistry / PubMed:30789718
MethodsX-ray diffraction
Resolution1.7 - 1.78 Å
Structure data

PDB-6npa:
X-ray crystal structure of TmpB, (R)-1-hydroxy-2-trimethylaminoethylphosphonate oxygenase, with (R)-1-hydroxy-2-trimethylaminoethylphosphonate
Method: X-RAY DIFFRACTION / Resolution: 1.73 Å

PDB-6npb:
X-ray crystal structure of TmpA, 2-trimethylaminoethylphosphonate hydroxylase, with Fe and 2OG
Method: X-RAY DIFFRACTION / Resolution: 1.73 Å

PDB-6npc:
X-ray crystal structure of TmpA, 2-trimethylaminoethylphosphonate hydroxylase, with Fe, 2OG, and 2-trimethylaminoethylphosphonate
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-6npd:
X-ray crystal structure of TmpA, 2-trimethylaminoethylphosphonate hydroxylase, with Fe, 2OG, and (R)-1-hydroxy-2-trimethylaminoethylphosphonate
Method: X-RAY DIFFRACTION / Resolution: 1.78 Å

Chemicals

ChemComp-FE:
Unknown entry

ChemComp-FE2:
Unknown entry

ChemComp-KVP:
(2R)-2-hydroxy-N,N,N-trimethyl-2-phosphonoethan-1-aminium

ChemComp-HOH:
WATER

ChemComp-AKG:
2-OXOGLUTARIC ACID

ChemComp-SO4:
SULFATE ION

ChemComp-KVV:
N,N,N-trimethyl-2-phosphonoethan-1-aminium

Source
  • leisingera caerulea (bacteria)
KeywordsOXIDOREDUCTASE / organophosphonate / iron oxygenase / HD-domain / gene annotation / enzyme

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