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TitleDiscovery of a small molecule inhibitor targeting dengue virus NS5 RNA-dependent RNA polymerase.
Journal, issue, pagesPlos Negl Trop Dis, Vol. 13, Page e0007894-e0007894, Year 2019
Publish dateDec 20, 2018 (structure data deposition date)
AuthorsShimizu, H. / Saito, A. / Mikuni, J. / Nakayama, E.E. / Koyama, H. / Honma, T. / Shirouzu, M. / Sekine, S.I. / Shioda, T.
External linksPlos Negl Trop Dis / PubMed:31738758
MethodsX-ray diffraction
Resolution1.97 - 2.43 Å
Structure data

PDB-6izx:
The RNA-dependent RNA polymerase domain of dengue 2 NS5, bound with RK-0404678
Method: X-RAY DIFFRACTION / Resolution: 2.43 Å

PDB-6izy:
The RNA-dependent RNA polymerase domain of dengue 2 NS5
Method: X-RAY DIFFRACTION / Resolution: 2.11 Å

PDB-6izz:
The RNA-dependent RNA polymerase domain of dengue 3 NS5, bound with RK-0404678
Method: X-RAY DIFFRACTION / Resolution: 1.97 Å

PDB-6j00:
The RNA-dependent RNA polymerase domain of dengue 3 NS5
Method: X-RAY DIFFRACTION / Resolution: 2.14 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-CO:
Unknown entry

ChemComp-B5C:
2-oxo-2H-1,3-benzoxathiol-5-yl acetate

ChemComp-HOH:
WATER

Source
  • dengue virus 2
  • dengue virus 3
KeywordsVIRAL PROTEIN / Dengue / NS5 / RNA-dependent RNA polymerase

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