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Structure paper

TitleStructural basis for the inhibitory effects of a novel reversible covalent ligand on PPAR gamma phosphorylation.
Journal, issue, pagesSci Rep, Vol. 9, Page 11168-11168, Year 2019
Publish dateOct 11, 2018 (structure data deposition date)
AuthorsJang, J.Y. / Kim, H. / Kim, H.J. / Suh, S.W. / Park, S.B. / Han, B.W.
External linksSci Rep / PubMed:31371757
MethodsX-ray diffraction
Resolution2.15 - 2.85 Å
Structure data

PDB-6ijr:
Human PPARgamma ligand binding domain complexed with SB1495
Method: X-RAY DIFFRACTION / Resolution: 2.85 Å

PDB-6ijs:
Human PPARgamma ligand binding domain complexed with SB1494
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-6jq7:
The ligand-free structure of human PPARgamma LBD in the presence of the SRC-1 coactivator peptide
Method: X-RAY DIFFRACTION / Resolution: 2.55 Å

Chemicals

ChemComp-A9C:
N-{[3-({[(1S,2R)-2-{[(2E)-2-cyano-4,4-dimethylpent-2-enoyl]amino}cyclopentyl]oxy}methyl)phenyl]methyl}-4-[(4-methylpiperazin-1-yl)methyl]benzamide

ChemComp-HOH:
WATER

ChemComp-A9F:
N-{[3-({[(1R,2S)-2-{[(2E)-2-cyano-4,4-dimethylpent-2-enoyl]amino}cyclopentyl]oxy}methyl)phenyl]methyl}-4-[(4-methylpiperazin-1-yl)methyl]benzamide

Source
  • homo sapiens (human)
KeywordsTRANSCRIPTION / Type 2 diabetes / Nuclear receptor / Inhibitor / Ligand binding domain / PPARgamma / agonist

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