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Structure paper

Title(ADP-ribosyl)hydrolases: Structural Basis for Differential Substrate Recognition and Inhibition.
Journal, issue, pagesCell Chem Biol, Vol. 25, Page 1533-1546.e12, Year 2018
Publish dateMar 21, 2018 (structure data deposition date)
AuthorsRack, J.G.M. / Ariza, A. / Drown, B.S. / Henfrey, C. / Bartlett, E. / Shirai, T. / Hergenrother, P.J. / Ahel, I.
External linksCell Chem Biol / PubMed:30472116
MethodsX-ray diffraction
Resolution1.23 - 2.1 Å
Structure data

PDB-6g1p:
Apo form of ADP-ribosylserine hydrolase ARH3 of Latimeria chalumnae
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-6g1q:
ADP-ribosylserine hydrolase ARH3 of Latimeria chalumnae in complex with ADP-ribose
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-6g28:
Human [protein ADP-ribosylargenine] hydrolase ARH1 in complex with ADP-ribose
Method: X-RAY DIFFRACTION / Resolution: 1.23 Å

PDB-6g2a:
Human [protein ADP-ribosylargenine] hydrolase ARH1 in complex with ADP-HPM
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-6hgz:
ADP-ribosylserine hydrolase ARH3 of Latimeria chalumnae in complex with ADP-ribose
Method: X-RAY DIFFRACTION / Resolution: 1.86 Å

PDB-6hh3:
ADP-ribosylserine hydrolase ARH3 of Latimeria chalumnae in complex with ADP-HPD
Method: X-RAY DIFFRACTION / Resolution: 1.82 Å

PDB-6hh4:
ADP-ribosylserine hydrolase ARH3 of Latimeria chalumnae in complex with ADP-ribosyl-L-arginine
Method: X-RAY DIFFRACTION / Resolution: 1.66 Å

PDB-6hh5:
ADP-ribosylserine hydrolase ARH3 of Latimeria chalumnae in complex with ADP-HPM
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-6hh6:
Human poly(ADP-ribose) glycohydrolase in complex with ADP-HPM
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-6hoz:
ADP-ribosylserine hydrolase ARH3 of Latimeria chalumnae in complex with inosine diphosphate ribose (IDPr)
Method: X-RAY DIFFRACTION / Resolution: 1.77 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-CIT:
CITRIC ACID

ChemComp-ACT:
ACETATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-AR6:
[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL

ChemComp-CL:
Unknown entry

ChemComp-A3R:
Adenosine Diphosphate (Hydroxymethyl)pyrrolidine monoalcohol

ChemComp-A1R:
5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLIDIN-2-YL]METHOXY}(HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]ADENOSINE

ChemComp-F2R:
ADP-ribosyl-L-arginine

ChemComp-SO4:
SULFATE ION

ChemComp-R5I:
inosine diphosphate ribose

ChemComp-R7I:
inosine diphosphate ribose

Source
  • latimeria chalumnae (coelacanth)
  • homo sapiens (human)
KeywordsHYDROLASE / ADP-ribosylation / ADP-ribose / ADPRHL2 / ADP-ribosylhydrolase like 2 / ADPRH / ADP-ribosylhydrolase / ARH1 / ADP-HPM / ADP-HPD / Arg-ADPr / Argenine-ADPr / ADP-Ribosyl-L-arginine / PARG / inosine diphosphate ribose / IDPr

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