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TitleSugar Acetonides are a Superior Motif for Addressing the Large, Solvent-Exposed Ribose-33 Pocket of tRNA-Guanine Transglycosylase.
Journal, issue, pagesChemistry, Vol. 24, Page 9957-9967, Year 2018
Publish dateFeb 1, 2018 (structure data deposition date)
AuthorsMovsisyan, L.D. / Schafer, E. / Nguyen, A. / Ehrmann, F.R. / Schwab, A. / Rossolini, T. / Zimmerli, D. / Wagner, B. / Daff, H. / Heine, A. ...Movsisyan, L.D. / Schafer, E. / Nguyen, A. / Ehrmann, F.R. / Schwab, A. / Rossolini, T. / Zimmerli, D. / Wagner, B. / Daff, H. / Heine, A. / Klebe, G. / Diederich, F.
External linksChemistry / PubMed:29939431
MethodsX-ray diffraction
Resolution1.36 Å
Structure data

PDB-6fmn:
tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 6-amino-2-((((2R,3S,4R,5R)-3,4-dihydroxy-5-methoxytetrahydrofuran-2-yl)methyl)amino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Method: X-RAY DIFFRACTION / Resolution: 1.36 Å

PDB-6fpu:
tRNA guanine Transglycosylase (TGT) in co-crystallized complex with 6-amino-2-((((3aS,5aR,8bS)-2,2,7,7-tetramethyltetrahydro-3aH-bis([1,3]dioxolo)[4,5-b:4',5'-d]pyran-3a-yl)methyl)amino)-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Method: X-RAY DIFFRACTION / Resolution: 1.36 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-CL:
Unknown entry

ChemComp-ZN:
Unknown entry

ChemComp-E4E:
6-azanyl-2-[[(2~{R},3~{S},4~{R},5~{R})-5-methoxy-3,4-bis(oxidanyl)oxolan-2-yl]methylamino]-3,7-dihydroimidazo[4,5-g]quinazolin-8-one

ChemComp-HOH:
WATER

ChemComp-E48:
6-azanyl-2-[[(1~{R},2~{S},6~{S},9~{R})-4,4,11,11-tetramethyl-3,5,7,10,12-pentaoxatricyclo[7.3.0.0^{2,6}]dodecan-6-yl]methylamino]-3,7-dihydroimidazo[4,5-g]quinazolin-8-one

Source
  • zymomonas mobilis subsp. mobilis (strain atcc 31821 / zm4 / cp4) (bacteria)
KeywordsTRANSFERASE / CO-CRYSTALLIZATION / CARBOHYDRATES / TRANSFERASE INHIBITOR

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