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Structure paper

TitleThe Antibiotic Novobiocin Binds and Activates the ATPase That Powers Lipopolysaccharide Transport.
Journal, issue, pagesJ. Am. Chem. Soc., Vol. 139, Page 17221-17224, Year 2017
Publish dateOct 5, 2017 (structure data deposition date)
AuthorsMay, J.M. / Owens, T.W. / Mandler, M.D. / Simpson, B.W. / Lazarus, M.B. / Sherman, D.J. / Davis, R.M. / Okuda, S. / Massefski, W. / Ruiz, N. / Kahne, D.
External linksJ. Am. Chem. Soc. / PubMed:29135241
MethodsX-ray diffraction
Resolution1.95 - 2 Å
Structure data

PDB-6b89:
E. coli LptB in complex with ADP and novobiocin
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6b8b:
E. coli LptB in complex with ADP and a novobiocin derivative
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

Chemicals

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-MG:
Unknown entry

ChemComp-NOV:
NOVOBIOCIN / antibiotic*YM

ChemComp-HOH:
WATER

ChemComp-CZJ:
(3s,5s,7s)-N-{7-[(3-O-carbamoyl-6-deoxy-5-methyl-4-O-methyl-beta-D-gulopyranosyl)oxy]-4-hydroxy-8-methyl-2-oxo-2H-1-ben

Source
  • escherichia coli (strain k12) (bacteria)
Keywordslipid transport/activator / LptB / ABC transporter / LPS transport / LIPID TRANSPORT / activator / lipid transport-activator complex

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