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TitleCrystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues.
Journal, issue, pagesSci Rep, Vol. 8, Page 2714-2714, Year 2018
Publish dateNov 1, 2017 (structure data deposition date)
AuthorsRoppongi, S. / Suzuki, Y. / Tateoka, C. / Fujimoto, M. / Morisawa, S. / Iizuka, I. / Nakamura, A. / Honma, N. / Shida, Y. / Ogasawara, W. ...Roppongi, S. / Suzuki, Y. / Tateoka, C. / Fujimoto, M. / Morisawa, S. / Iizuka, I. / Nakamura, A. / Honma, N. / Shida, Y. / Ogasawara, W. / Tanaka, N. / Sakamoto, Y. / Nonaka, T.
External linksSci Rep / PubMed:29426867
MethodsX-ray diffraction
Resolution1.9 - 2.47 Å
Structure data

PDB-5yp1:
Crystal structure of dipeptidyl peptidase IV (DPP IV) from Pseudoxanthomonas mexicana WO24
Method: X-RAY DIFFRACTION / Resolution: 2.47 Å

PDB-5yp2:
Crystal structure of dipeptidyl peptidase IV (DPP IV) with DPP4 inhibitor from Pseudoxanthomonas mexicana WO24
Method: X-RAY DIFFRACTION / Resolution: 2.13 Å

PDB-5yp3:
Crystal structure of dipeptidyl peptidase IV (DPP IV) with Ile-Pro from Pseudoxanthomonas mexicana
Method: X-RAY DIFFRACTION / Resolution: 2.44 Å

PDB-5yp4:
Crystal structure of dipeptidyl peptidase IV (DPP IV) with Lys-Pro from Pseudoxanthomonas mexicana WO24
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-8YC:
(2S,5R)-1-[2-[[1-(hydroxymethyl)cyclopentyl]amino]ethanoyl]pyrrolidine-2,5-dicarbonitrile

ChemComp-ILE:
ISOLEUCINE

ChemComp-PRO:
PROLINE

ChemComp-LYS:
LYSINE

Source
  • pseudoxanthomonas mexicana (bacteria)
KeywordsHYDROLASE / DAP IV / Clan SC S9 / peptidase / DPP4 / DPP8 / DPP9

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