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TitleTracing whale myoglobin evolution by resurrecting ancient proteins.
Journal, issue, pagesSci Rep, Vol. 8, Page 16883-16883, Year 2018
Publish dateSep 7, 2017 (structure data deposition date)
AuthorsIsogai, Y. / Imamura, H. / Nakae, S. / Sumi, T. / Takahashi, K.I. / Nakagawa, T. / Tsuneshige, A. / Shirai, T.
External linksSci Rep / PubMed:30442991
MethodsX-ray diffraction
Resolution0.77 - 2.4 Å
Structure data

PDB-5yce:
Sperm whale myoglobin swMb
Method: X-RAY DIFFRACTION / Resolution: 0.77 Å

PDB-5ycg:
Ancestral myoglobin aMbWp of Pakicetus relative
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-5ych:
Ancestral myoglobin aMbWb of Basilosaurus relative (monophyly)
Method: X-RAY DIFFRACTION / Resolution: 1.354 Å

PDB-5yci:
Ancestral myoglobin aMbWb' of Basilosaurus relative (polyphyly)
Method: X-RAY DIFFRACTION / Resolution: 1.97 Å

PDB-5ycj:
Ancestral myoglobin aMbWb' of Basilosaurus relative (polyphyly) imidazole-ligand
Method: X-RAY DIFFRACTION / Resolution: 1.58 Å

Chemicals

ChemComp-HEM:
PROTOPORPHYRIN IX CONTAINING FE

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

ChemComp-IMD:
IMIDAZOLE

Source
  • physeter catodon (sperm whale)
KeywordsOXYGEN STORAGE / Globin / Molecular Archaeology / Ancient protein / Protein evolution / Deep-sea adaptation

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