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Structure paper

TitleStructural basis for TNA synthesis by an engineered TNA polymerase.
Journal, issue, pagesNat Commun, Vol. 8, Page 1810-1810, Year 2017
Publish dateMay 18, 2017 (structure data deposition date)
AuthorsChim, N. / Shi, C. / Sau, S.P. / Nikoomanzar, A. / Chaput, J.C.
External linksNat Commun / PubMed:29180809
MethodsX-ray diffraction
Resolution2.05 - 3.2 Å
Structure data

PDB-5vu5:
TNA polymerase, apo
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-5vu6:
TNA polymerase binary complex with primer/template duplex
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-5vu7:
TNA polymerase, open ternary complex
Method: X-RAY DIFFRACTION / Resolution: 2.72 Å

PDB-5vu8:
TNA polymerase, closed ternary complex
Method: X-RAY DIFFRACTION / Resolution: 3.2 Å

PDB-5vu9:
TNA polymerase, translocated product
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-SO4:
SULFATE ION

ChemComp-FA2:
5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXYTETRAHYDROFURAN-3-YL DIHYDROGEN PHOSPHATE

ChemComp-9O7:
[(3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-3-yl] [oxidanyl(phosphonooxy)phosphoryl] hydrogen phosphate

ChemComp-HOH:
WATER

Source
  • thermococcus kodakarensis (archaea)
  • synthetic construct (others)
KeywordsTRANSFERASE / protein-nucleic acid complex / TRANSFERASE/DNA / TRANSFERASE-DNA complex

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