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Structure paper

TitleGuanine Can Direct Binding Specificity of Ru-dipyridophenazine (dppz) Complexes to DNA through Steric Effects.
Journal, issue, pagesChemistry, Vol. 23, Page 4981-4985, Year 2017
Publish dateJul 4, 2016 (structure data deposition date)
AuthorsHall, J.P. / Gurung, S.P. / Henle, J. / Poidl, P. / Andersson, J. / Lincoln, P. / Winter, G. / Sorensen, T. / Cardin, D.J. / Brazier, J.A. / Cardin, C.J.
External linksChemistry / PubMed:28105682
MethodsX-ray diffraction
Resolution1.28 - 1.85 Å
Structure data

PDB-5lfs:
Lambda-[Ru(bpy)2(dppz)]2+ bound to brominated DNA
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-5lfw:
Lambda-[Ru(phen)2(dppz)]2+ bound to a short substituted DNA sequence
Method: X-RAY DIFFRACTION / Resolution: 1.28 Å

PDB-5lfx:
Lambda-[Ru(phen)2(dppz-11,12-Me)]2+ bound to a short substituted DNA sequence
Method: X-RAY DIFFRACTION / Resolution: 1.56 Å

Chemicals

ChemComp-BA:
Unknown entry

ChemComp-R1Z:
Delta-[Ru(bpy)2dppz]2+

ChemComp-CL:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-RKP:
Lambda-Ru(phen)2(dppz) complex

ChemComp-9ZQ:
Ru(phen)2(dppz-11,12-Me2)

Source
  • synthetic construct (others)
KeywordsDNA / ruthenium / intercalation / light-switch

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