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Structure paper

TitleMycofactocin-associated mycobacterial dehydrogenases with non-exchangeable NAD cofactors.
Journal, issue, pagesSci Rep, Vol. 7, Page 41074-41074, Year 2017
Publish dateAug 12, 2010 (structure data deposition date)
AuthorsHaft, D.H. / Pierce, P.G. / Mayclin, S.J. / Sullivan, A. / Gardberg, A.S. / Abendroth, J. / Begley, D.W. / Phan, I.Q. / Staker, B.L. / Myler, P.J. ...Haft, D.H. / Pierce, P.G. / Mayclin, S.J. / Sullivan, A. / Gardberg, A.S. / Abendroth, J. / Begley, D.W. / Phan, I.Q. / Staker, B.L. / Myler, P.J. / Marathias, V.M. / Lorimer, D.D. / Edwards, T.E.
External linksSci Rep / PubMed:28120876
MethodsX-ray diffraction
Resolution1.5 - 2.15 Å
Structure data

PDB-3oec:
Crystal structure of carveol dehydrogenase from Mycobacterium thermoresistibile
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-3pgx:
Crystal structure of a putative carveol dehydrogenase from Mycobacterium paratuberculosis bound to nicotinamide adenine dinucleotide
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-3pxx:
Crystal structure of carveol dehydrogenase from Mycobacterium avium bound to nicotinamide adenine dinucleotide
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-3s55:
Crystal structure of a putative short-chain dehydrogenase/reductase from Mycobacterium abscessus bound to NAD
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-3sx2:
Crystal structure of a putative 3-ketoacyl-(acyl-carrier-protein) reductase from Mycobacterium paratuberculosis in complex with NAD
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-3t7c:
Crystal structure of carveol dehydrogenase from Mycobacterium avium bound to NAD
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-3tsc:
Crystal structure of short chain dehydrogenase MAP_2410 from Mycobacterium paratuberculosis bound to NAD
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-4rgb:
Crystal structure of a putative carveol dehydrogenase from Mycobacterium avium bound to NAD
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-5ej2:
Crystal structure of Carveol dehydrogenase from Mycobacterium avium in complex with NAD
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

Chemicals

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-NAD:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE / NAD*YM

ChemComp-CA:
Unknown entry

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-PO4:
PHOSPHATE ION

Source
  • mycobacterium thermoresistibile (bacteria)
  • mycobacterium avium (bacteria)
  • mycobacterium abscessus (bacteria)
  • mycobacterium avium subsp. paratuberculosis (bacteria)
KeywordsOXIDOREDUCTASE / SSGCID / Structural Genomics / Seattle Structural Genomics Center for Infectious Disease / DEHYDROGENASE / carveol dehydrogenase / short chain dehydrogenase/reductase superfamily / nicotinamide adenine dinucleotide / NAD / putative uncharacterized protein / Mycobacterium / tuberculosis / non-pathogenic strain / ortholog / SDR / 3-KETOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE / MYCOBACERIUM PARATUBERCULOSIS / putative 3-KETOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE / MAV_1393 / (+)-trans-carveol dehydrogenase / (+)-(S)-carvone / nucleotide / adenine dinucleotide / short chain dehydrogenase / SRD family protein / NIAID / National Institute of Allergy and Infectious Diseases / putative non-exchangeable NAD / Mycobacterium avium

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