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Structure paper

TitleA novel transcriptional regulator of L-arabinose utilization in human gut bacteria.
Journal, issue, pagesNucleic Acids Res., Vol. 43, Page 10546-10559, Year 2015
Publish dateJun 1, 2015 (structure data deposition date)
AuthorsChang, C. / Tesar, C. / Li, X. / Kim, Y. / Rodionov, D.A. / Joachimiak, A.
External linksNucleic Acids Res. / PubMed:26438537
MethodsX-ray diffraction
Resolution1.95 - 3.06 Å
Structure data

PDB-5bs6:
Apo structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-5dd4:
Apo structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI
Method: X-RAY DIFFRACTION / Resolution: 2.56 Å

PDB-5ddg:
The structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI in complex with target double strand DNA
Method: X-RAY DIFFRACTION / Resolution: 3.06 Å

PDB-5deq:
Crystal structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI in complex with L-arabinose
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-ACT:
ACETATE ION

ChemComp-MLA:
MALONIC ACID

ChemComp-FMT:
FORMIC ACID

ChemComp-ARA:
alpha-L-arabinopyranose

ChemComp-SO4:
SULFATE ION

Source
  • bacteroides thetaiotaomicron (strain atcc 29148 / dsm 2079 / nctc 10582 / e50 / vpi-5482) (bacteria)
  • bacteroides thetaiotaomicron vpi-5482 (bacteria)
KeywordsTRANSCRIPTION / Structural Genomics / PSI-Biology / Midwest Center for Structural Genomics / MCSG / transcriptional regulator / Bacteroides thetaiotaomicron / helix-turn-helix motif / Nudix fold / DNA binding / TRANSCRIPTION REGULATOR / AraR / TRANSCRIPTION REGULATOR/DNA / TRANSCRIPTION REGULATOR-DNA complex

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