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Structure paper

TitleOxygen diffusion pathways in a cofactor-independent dioxygenase.
Journal, issue, pagesChem Sci, Vol. 6, Page 6341-6348, Year 2015
Publish dateMar 5, 2015 (structure data deposition date)
AuthorsDi Russo, N.V. / Condurso, H.L. / Li, K. / Bruner, S.D. / Roitberg, A.E.
External linksChem Sci / PubMed:26508997
MethodsX-ray diffraction
Resolution2.58 Å
Structure data

PDB-4ylh:
Crystal structure of DpgC with bound substrate analog and Xe on oxygen diffusion pathway
Method: X-RAY DIFFRACTION / Resolution: 2.58 Å

Chemicals

ChemComp-XE:
XENON

ChemComp-YE1:
[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE

ChemComp-HOH:
WATER

Source
  • streptomyces toyocaensis (bacteria)
KeywordsHYDROLASE / Dioxygenase / Xe complex

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