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Structure paper

Titlealpha beta T cell antigen receptor recognition of CD1a presenting self lipid ligands.
Journal, issue, pagesNat. Immunol., Vol. 16, Page 258-266, Year 2015
Publish dateDec 7, 2014 (structure data deposition date)
AuthorsBirkinshaw, R.W. / Pellicci, D.G. / Cheng, T.Y. / Keller, A.N. / Sandoval-Romero, M. / Gras, S. / de Jong, A. / Uldrich, A.P. / Moody, D.B. / Godfrey, D.I. / Rossjohn, J.
External linksNat. Immunol. / PubMed:25642819
MethodsX-ray diffraction
Resolution1.91 - 2.98 Å
Structure data

PDB-4x6b:
BK6 TCR apo structure
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-4x6c:
CD1a ternary complex with lysophosphatidylcholine and BK6 TCR
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

PDB-4x6d:
CD1a ternary complex with endogenous lipids and BK6 TCR
Method: X-RAY DIFFRACTION / Resolution: 2.98 Å

PDB-4x6e:
CD1a binary complex with lysophosphatidylcholine
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-4x6f:
CD1a binary complex with sphingomyelin
Method: X-RAY DIFFRACTION / Resolution: 1.91 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-42H:
(4R,7R,18Z)-4,7-dihydroxy-N,N,N-trimethyl-10-oxo-3,5,9-trioxa-4-phosphaheptacos-18-en-1-aminium 4-oxide

ChemComp-OLA:
OLEIC ACID

ChemComp-PAM:
PALMITOLEIC ACID

ChemComp-MLT:
D-MALATE

ChemComp-3XU:
(4S,7S,23Z)-4-hydroxy-7-[(1S,2Z)-1-hydroxyhexadec-2-en-1-yl]-N,N,N-trimethyl-9-oxo-3,5-dioxa-8-aza-4-phosphadotriacont-

Source
  • homo sapiens (human)
KeywordsIMMUNE SYSTEM / T cell receptor / CD1a / Autoimmunity / lipid antigen / TCR / Immune complex

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