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Structure paper

TitleEnhanced TCR footprint by a novel glycolipid increases NKT-dependent tumor protection.
Journal, issue, pagesJ. Immunol., Vol. 191, Page 2916-2925, Year 2013
Publish dateJan 14, 2013 (structure data deposition date)
AuthorsAspeslagh, S. / Nemcovic, M. / Pauwels, N. / Venken, K. / Wang, J. / Van Calenbergh, S. / Zajonc, D.M. / Elewaut, D.
External linksJ. Immunol. / PubMed:23960235
MethodsX-ray diffraction
Resolution2.8 - 3 Å
Structure data

PDB-4irj:
Structure of the mouse CD1d-4ClPhC-alpha-GalCer-iNKT TCR complex
Method: X-RAY DIFFRACTION / Resolution: 3 Å

PDB-4irs:
Structure of the mouse CD1d-PyrC-alpha-GalCer-iNKT TCR complex
Method: X-RAY DIFFRACTION / Resolution: 2.8 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-1L9:
N-[(2S,3S,4R)-1-({6-O-[(4-chlorophenyl)carbamoyl]-alpha-D-galactopyranosyl}oxy)-3,4-dihydroxyoctadecan-2-yl]hexacosanamide

ChemComp-HOH:
WATER

ChemComp-1LA:
N-[(2S,3S,4R)-3,4-dihydroxy-1-{[6-O-(pyridin-4-ylcarbamoyl)-alpha-D-galactopyranosyl]oxy}octadecan-2-yl]hexacosanamide

Source
  • mus musculus (house mouse)
  • homo sapiens (human)
KeywordsIMMUNE SYSTEM / antigen presentation / glycolipid / NKT cells

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