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Structure paper

TitleCrystal structures of glycoside hydrolase family 3 beta-glucosidase 1 from Aspergillus aculeatus
Journal, issue, pagesBiochem. J., Vol. 452, Page 211-221, Year 2013
Publish dateDec 20, 2012 (structure data deposition date)
AuthorsSuzuki, K. / Sumitani, J. / Nam, Y.W. / Nishimaki, T. / Tani, S. / Wakagi, T. / Kawaguchi, T. / Fushinobu, S.
External linksBiochem. J. / PubMed:23537284
MethodsX-ray diffraction
Resolution1.8 - 2.45 Å
Structure data

PDB-4iib:
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4iic:
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with isofagomine
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4iid:
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with 1-deoxynojirimycin
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4iie:
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with calystegine B(2)
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-4iif:
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with castanospermine
Method: X-RAY DIFFRACTION / Resolution: 2.45 Å

PDB-4iig:
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with D-glucose
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4iih:
Crystal structure of beta-glucosidase 1 from Aspergillus aculeatus in complex with thiocellobiose
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-MRD:
(4R)-2-METHYLPENTANE-2,4-DIOL / precipitant*YM

ChemComp-NA:
Unknown entry

ChemComp-ACY:
ACETIC ACID

ChemComp-HOH:
WATER

ChemComp-IFM:
5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE

ChemComp-NOJ:
1-DEOXYNOJIRIMYCIN / inhibitor*YM

ChemComp-CGB:
CALYSTEGINE B2

ChemComp-CTS:
CASTANOSPERMINE / antivirus, inhibitor, alkaloid*YM

ChemComp-BGC:
beta-D-glucopyranose

Source
  • aspergillus aculeatus (mold)
KeywordsHYDROLASE / TIM barrel / High-mannose N-glycosylations / Extracellular

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